RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
LINC01238-202ENST00000426962 PDE8AO60658 829 aa13.79□□□□□ -0.2
LINC01238-202ENST00000426962 APLP1P51693 650 aa13.79□□□□□ -0.2
LINC01238-202ENST00000426962 SLC51AQ86UW1 340 aa13.79□□□□□ -0.2
LINC01238-202ENST00000426962 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
LINC01238-202ENST00000426962 MPNDQ8N594 471 aa13.79□□□□□ -0.2
LINC01238-202ENST00000426962 RTFDC1Q9BY42 306 aaPredicted RBP13.79□□□□□ -0.2
LINC01238-202ENST00000426962 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
LINC01238-202ENST00000426962 IGKV5-2P06315 115 aa13.78□□□□□ -0.2
LINC01238-202ENST00000426962 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
LINC01238-202ENST00000426962 FLIIQ13045 1269 aa13.78□□□□□ -0.2
LINC01238-202ENST00000426962 DPP8Q6V1X1 898 aaPredicted RBP13.78□□□□□ -0.2
LINC01238-202ENST00000426962 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
LINC01238-202ENST00000426962 TIAM2Q8IVF5 1701 aa13.78□□□□□ -0.2
LINC01238-202ENST00000426962 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 PPIP5K2O43314 1243 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.21
LINC01238-202ENST00000426962 GPC2Q8N158 579 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.21
LINC01238-202ENST00000426962 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.21
LINC01238-202ENST00000426962 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 WDR90Q96KV7 1748 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.21
LINC01238-202ENST00000426962 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
LINC01238-202ENST00000426962 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
LINC01238-202ENST00000426962 AOC3Q16853 763 aa13.76□□□□□ -0.21
LINC01238-202ENST00000426962 CCDC152Q4G0S7 254 aa13.76□□□□□ -0.21
LINC01238-202ENST00000426962 NIM1KQ8IY84 436 aa13.76□□□□□ -0.21
LINC01238-202ENST00000426962 CDHR2Q9BYE9 1310 aa13.75□□□□□ -0.21
LINC01238-202ENST00000426962 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
LINC01238-202ENST00000426962 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
LINC01238-202ENST00000426962 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
LINC01238-202ENST00000426962 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
LINC01238-202ENST00000426962 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
LINC01238-202ENST00000426962 LAMB2P55268 1798 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 H7C1W4 665 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 ZNRF3Q9ULT6 936 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
LINC01238-202ENST00000426962 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
LINC01238-202ENST00000426962 E9PSI1 815 aa13.73□□□□□ -0.21
LINC01238-202ENST00000426962 EPHX2P34913 555 aa13.73□□□□□ -0.21
LINC01238-202ENST00000426962 GCKRQ14397 625 aa13.73□□□□□ -0.21
LINC01238-202ENST00000426962 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
LINC01238-202ENST00000426962 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-202ENST00000426962 LINS1Q8NG48 757 aa13.73□□□□□ -0.21
LINC01238-202ENST00000426962 CEP350Q5VT06 3117 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 CTSWP56202 376 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 GPSM2P81274 684 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 LDHDQ86WU2 507 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 DNAJC5GQ8N7S2 189 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 TTLL11Q8NHH1 800 aa13.72□□□□□ -0.21
LINC01238-202ENST00000426962 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
LINC01238-202ENST00000426962 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
LINC01238-202ENST00000426962 CXCL9Q07325 125 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
LINC01238-202ENST00000426962 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 CDC5LQ99459 802 aaKnown RBP13.71□□□□□ -0.21
LINC01238-202ENST00000426962 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 COL4A5P29400 1685 aa13.71□□□□□ -0.21
LINC01238-202ENST00000426962 TAF1P21675 1872 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 F6X3S4 739 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 TNIP1Q15025 636 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 CIAPIN1Q6FI81 312 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 EYA3Q99504 573 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
LINC01238-202ENST00000426962 SCN4AP35499 1836 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 EPS15P42566 896 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 SCNN1DP51172 638 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 CASP7P55210 303 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 HTRA3P83110 453 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
LINC01238-202ENST00000426962 GREM2Q9H772 168 aa13.69□□□□□ -0.22
LINC01238-202ENST00000426962 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-202ENST00000426962 YDJCA8MPS7 323 aa13.68□□□□□ -0.22
LINC01238-202ENST00000426962 RAD17O75943 681 aa13.68□□□□□ -0.22
LINC01238-202ENST00000426962 CSF1RP07333 972 aa13.68□□□□□ -0.22
LINC01238-202ENST00000426962 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
LINC01238-202ENST00000426962 RTL9Q8NET4 1388 aa13.68□□□□□ -0.22
LINC01238-202ENST00000426962 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
LINC01238-202ENST00000426962 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
LINC01238-202ENST00000426962 MRPL50Q8N5N7 158 aaKnown RBP13.67□□□□□ -0.22
LINC01238-202ENST00000426962 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
LINC01238-202ENST00000426962 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
LINC01238-202ENST00000426962 GPRC5DQ9NZD1 345 aa13.67□□□□□ -0.22
LINC01238-202ENST00000426962 MINPP1Q9UNW1 487 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms