RNA–Protein interactions for RNA: ENST00000426385.3

PMP22-204, Transcript of peripheral myelin protein 22, humanhuman

TSL 2 BASIC

Gene PMP22, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-204ENST00000426385 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
PMP22-204ENST00000426385 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
PMP22-204ENST00000426385 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 ABCC4O15439 1325 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 EPHX2P34913 555 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 MLLT1Q03111 559 aaPredicted RBP12.16□□□□□ -0.46
PMP22-204ENST00000426385 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 RPGRQ92834 1020 aaKnown RBP12.16□□□□□ -0.46
PMP22-204ENST00000426385 FAM89AQ96GI7 184 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 MYD88Q99836 296 aa12.16□□□□□ -0.46
PMP22-204ENST00000426385 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
PMP22-204ENST00000426385 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 LTBP3Q9NS15 1303 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
PMP22-204ENST00000426385 MAP2K1Q02750 393 aaPredicted RBP12.15□□□□□ -0.46
PMP22-204ENST00000426385 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
PMP22-204ENST00000426385 CCDC93Q567U6 631 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 WDR63Q8IWG1 891 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
PMP22-204ENST00000426385 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
PMP22-204ENST00000426385 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 RNF123Q5XPI4 1314 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 PPEF1O14829 653 aaPredicted RBP12.14□□□□□ -0.47
PMP22-204ENST00000426385 VAMP4O75379 141 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 SLC10A5Q5PT55 438 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
PMP22-204ENST00000426385 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
PMP22-204ENST00000426385 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
PMP22-204ENST00000426385 CYP4F22Q6NT55 531 aa12.13□□□□□ -0.47
PMP22-204ENST00000426385 NLRP3Q96P20 1036 aa12.13□□□□□ -0.47
PMP22-204ENST00000426385 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
PMP22-204ENST00000426385 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
PMP22-204ENST00000426385 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
PMP22-204ENST00000426385 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
PMP22-204ENST00000426385 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
PMP22-204ENST00000426385 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
PMP22-204ENST00000426385 METTL22Q9BUU2 404 aaPredicted RBP12.12□□□□□ -0.47
PMP22-204ENST00000426385 MYH3P11055 1940 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 TRAF5O00463 557 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 IRS4O14654 1257 aaPredicted RBP12.11□□□□□ -0.47
PMP22-204ENST00000426385 AOC2O75106 756 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 FLIIQ13045 1269 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
PMP22-204ENST00000426385 MIER1Q8N108 512 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
PMP22-204ENST00000426385 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
PMP22-204ENST00000426385 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
PMP22-204ENST00000426385 SCN4AP35499 1836 aa12.1□□□□□ -0.47
PMP22-204ENST00000426385 F6X3S4 739 aa12.1□□□□□ -0.47
PMP22-204ENST00000426385 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
PMP22-204ENST00000426385 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
PMP22-204ENST00000426385 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
PMP22-204ENST00000426385 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
PMP22-204ENST00000426385 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
PMP22-204ENST00000426385 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
PMP22-204ENST00000426385 EPS15P42566 896 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 GRAPQ13588 217 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
PMP22-204ENST00000426385 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
PMP22-204ENST00000426385 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
PMP22-204ENST00000426385 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
PMP22-204ENST00000426385 A0A1B0GUL6 1792 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 FZD9O00144 591 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 RGS19P49795 217 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
PMP22-204ENST00000426385 CST9Q5W186 159 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
PMP22-204ENST00000426385 DDX46Q7L014 1031 aaKnown RBP12.08□□□□□ -0.48
PMP22-204ENST00000426385 GPC2Q8N158 579 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 CCDC191Q8NCU4 936 aa12.08□□□□□ -0.48
PMP22-204ENST00000426385 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 CASP8AP2Q9UKL3 1982 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
PMP22-204ENST00000426385 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
PMP22-204ENST00000426385 ECE1P42892 770 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
PMP22-204ENST00000426385 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
PMP22-204ENST00000426385 AOC3Q16853 763 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 PSMD1Q99460 953 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 MCOLN1Q9GZU1 580 aa12.07□□□□□ -0.48
PMP22-204ENST00000426385 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
PMP22-204ENST00000426385 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
PMP22-204ENST00000426385 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
PMP22-204ENST00000426385 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms