RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 KCNQ2O43526 872 aa18.89■□□□□ 0.62
PKP4-205ENST00000426248 GTF2F1P35269 517 aaKnown RBP eCLIP18.89■□□□□ 0.623e-10■■■■□ 19.7
PKP4-205ENST00000426248 ERC1Q8IUD2 1116 aa18.89■□□□□ 0.62
PKP4-205ENST00000426248 SMARCC1Q92922 1105 aaPredicted RBP18.89■□□□□ 0.62
PKP4-205ENST00000426248 ERC2O15083 957 aa18.89■□□□□ 0.61
PKP4-205ENST00000426248 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
PKP4-205ENST00000426248 RHPN1Q8TCX5 695 aa18.89■□□□□ 0.61
PKP4-205ENST00000426248 NFAT5O94916 1531 aa18.89■□□□□ 0.61
PKP4-205ENST00000426248 JCADQ9P266 1359 aa18.89■□□□□ 0.61
PKP4-205ENST00000426248 TPD52L1Q16890 204 aaPredicted RBP18.88■□□□□ 0.61
PKP4-205ENST00000426248 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 GCKRQ14397 625 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 ATG3Q9NT62 314 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 ZBTB1Q9Y2K1 713 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 AFF2P51816 1311 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 NEK4P51957 841 aa18.88■□□□□ 0.61
PKP4-205ENST00000426248 CWC22Q9HCG8 908 aaKnown RBP18.88■□□□□ 0.61
PKP4-205ENST00000426248 IBTKQ9P2D0 1353 aaPredicted RBP18.87■□□□□ 0.61
PKP4-205ENST00000426248 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
PKP4-205ENST00000426248 ZPR1O75312 459 aa18.87■□□□□ 0.61
PKP4-205ENST00000426248 LOC102724428A0A0B4J2F2 783 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 SIK1P57059 783 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 DDIT3P35638 169 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 KRT222Q8N1A0 295 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
PKP4-205ENST00000426248 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 CAMTA1Q9Y6Y1 1673 aa18.86■□□□□ 0.61
PKP4-205ENST00000426248 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 SPATA31A1Q5TZJ5 1347 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 BOLA2Q9H3K6 86 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 NIP7Q9Y221 180 aaKnown RBP eCLIP18.85■□□□□ 0.61
PKP4-205ENST00000426248 REC8O95072 547 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 GABPB1Q06547 395 aaPredicted RBP18.85■□□□□ 0.61
PKP4-205ENST00000426248 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
PKP4-205ENST00000426248 CHMP4CQ96CF2 233 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 MPHOSPH8Q99549 860 aa18.85■□□□□ 0.61
PKP4-205ENST00000426248 TRPC5Q9UL62 973 aaPredicted RBP18.85■□□□□ 0.61
PKP4-205ENST00000426248 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
PKP4-205ENST00000426248 MARCH10Q8NA82 808 aaPredicted RBP18.84■□□□□ 0.61
PKP4-205ENST00000426248 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
PKP4-205ENST00000426248 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
PKP4-205ENST00000426248 THRAP3Q9Y2W1 955 aaKnown RBP18.84■□□□□ 0.61
PKP4-205ENST00000426248 TNNT1P13805 278 aa18.84■□□□□ 0.61
PKP4-205ENST00000426248 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
PKP4-205ENST00000426248 AK7Q96M32 723 aa18.84■□□□□ 0.61
PKP4-205ENST00000426248 NAA30Q147X3 362 aaPredicted RBP18.83■□□□□ 0.61
PKP4-205ENST00000426248 GNPATO15228 680 aa18.83■□□□□ 0.6
PKP4-205ENST00000426248 FIBPO43427 364 aa18.83■□□□□ 0.6
PKP4-205ENST00000426248 MED1Q15648 1581 aaPredicted RBP18.83■□□□□ 0.6
PKP4-205ENST00000426248 CCDC87Q9NVE4 849 aa18.83■□□□□ 0.6
PKP4-205ENST00000426248 PDE1AP54750 535 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
PKP4-205ENST00000426248 SEPT12Q8IYM1 358 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
PKP4-205ENST00000426248 KDM6AO15550 1401 aaPredicted RBP18.82■□□□□ 0.6
PKP4-205ENST00000426248 OVOS2A0A0G2JMS6 1433 aa18.81■□□□□ 0.6
PKP4-205ENST00000426248 POLR3GO15318 223 aaPredicted RBP18.81■□□□□ 0.6
PKP4-205ENST00000426248 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
PKP4-205ENST00000426248 LDHAL6AQ6ZMR3 332 aa18.81■□□□□ 0.6
PKP4-205ENST00000426248 LTN1O94822 1766 aa18.81■□□□□ 0.6
PKP4-205ENST00000426248 PYCARDQ9ULZ3 195 aa18.81■□□□□ 0.6
PKP4-205ENST00000426248 SDSP20132 328 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 RFC4P35249 363 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 TTC22Q5TAA0 569 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
PKP4-205ENST00000426248 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 ZNF594Q96JF6 807 aaPredicted RBP18.8■□□□□ 0.6
PKP4-205ENST00000426248 SLIT3O75094 1523 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
PKP4-205ENST00000426248 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 VPS37DQ86XT2 251 aa18.8■□□□□ 0.6
PKP4-205ENST00000426248 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
PKP4-205ENST00000426248 SPATA31A5Q5VU36 1347 aa18.79■□□□□ 0.6
PKP4-205ENST00000426248 SPATA31A7Q8IWB4 1347 aa18.79■□□□□ 0.6
PKP4-205ENST00000426248 NOL10Q9BSC4 688 aaKnown RBP18.79■□□□□ 0.6
PKP4-205ENST00000426248 TOMM22Q9NS69 142 aa18.79■□□□□ 0.6
PKP4-205ENST00000426248 IRS4O14654 1257 aaPredicted RBP18.78■□□□□ 0.6
PKP4-205ENST00000426248 TCIRG1Q13488 830 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 SMIM5Q71RC9 77 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 CCDC191Q8NCU4 936 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 RUFY2Q8WXA3 655 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
PKP4-205ENST00000426248 GPATCH11Q8N954 259 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 TRIM5Q9C035 493 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
PKP4-205ENST00000426248 KIF2CQ99661 725 aa18.78■□□□□ 0.6
PKP4-205ENST00000426248 GIMAP6Q6P9H5 292 aa18.77■□□□□ 0.6
PKP4-205ENST00000426248 GOLGA6L4A6NEF3 574 aa18.77■□□□□ 0.6
PKP4-205ENST00000426248 GADD45BO75293 160 aaPredicted RBP18.77■□□□□ 0.6
PKP4-205ENST00000426248 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
PKP4-205ENST00000426248 TEX35Q5T0J7 233 aa18.77■□□□□ 0.6
PKP4-205ENST00000426248 ADCY9O60503 1353 aa18.77■□□□□ 0.6
PKP4-205ENST00000426248 TRIM37O94972 964 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms