RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SRGNP10124 158 aa30.18■■■□□ 2.42
APOE-202ENST00000425718 ALDH1B1P30837 517 aa30.18■■■□□ 2.42
APOE-202ENST00000425718 DDX46Q7L014 1031 aaKnown RBP30.18■■■□□ 2.42
APOE-202ENST00000425718 CNKSR1Q969H4 720 aa30.18■■■□□ 2.42
APOE-202ENST00000425718 C20orf194Q5TEA3 1177 aa30.17■■■□□ 2.42
APOE-202ENST00000425718 SUCLG2Q96I99 432 aa30.17■■■□□ 2.42
APOE-202ENST00000425718 SYT17Q9BSW7 474 aa30.17■■■□□ 2.42
APOE-202ENST00000425718 HOXA10P31260 410 aaPredicted RBP30.16■■■□□ 2.42
APOE-202ENST00000425718 CRAMP1Q96RY5 1269 aa30.16■■■□□ 2.42
APOE-202ENST00000425718 CSF1RP07333 972 aa30.15■■■□□ 2.42
APOE-202ENST00000425718 TTLL11Q8NHH1 800 aa30.15■■■□□ 2.42
APOE-202ENST00000425718 CACNA1SQ13698 1873 aa30.14■■■□□ 2.42
APOE-202ENST00000425718 RABL6Q3YEC7 729 aaPredicted RBP30.14■■■□□ 2.42
APOE-202ENST00000425718 CDC5LQ99459 802 aaKnown RBP30.14■■■□□ 2.42
APOE-202ENST00000425718 PIM2Q9P1W9 311 aa30.14■■■□□ 2.42
APOE-202ENST00000425718 DPEP1P16444 411 aa30.13■■■□□ 2.41
APOE-202ENST00000425718 FOXO4P98177 505 aa30.13■■■□□ 2.41
APOE-202ENST00000425718 TMC4Q7Z404 712 aa30.13■■■□□ 2.41
APOE-202ENST00000425718 ZNF622Q969S3 477 aaKnown RBP eCLIP30.13■■■□□ 2.412e-7■□□□□ 8.5
APOE-202ENST00000425718 BICC1Q9H694 974 aaKnown RBP30.13■■■□□ 2.41
APOE-202ENST00000425718 LRRFIP2Q9Y608 721 aaKnown RBP30.13■■■□□ 2.41
APOE-202ENST00000425718 LMBR1LQ6UX01 489 aa30.12■■■□□ 2.41
APOE-202ENST00000425718 CCDC57Q2TAC2 916 aa30.11■■■□□ 2.41
APOE-202ENST00000425718 TTLL6Q8N841 843 aa30.11■■■□□ 2.41
APOE-202ENST00000425718 ZBTB40Q9NUA8 1239 aa30.11■■■□□ 2.41
APOE-202ENST00000425718 CHMP3Q9Y3E7 222 aa30.11■■■□□ 2.41
APOE-202ENST00000425718 ARFGEF1Q9Y6D6 1849 aa30.1■■■□□ 2.41
APOE-202ENST00000425718 A0A0G2JLW4 131 aa30.1■■■□□ 2.41
APOE-202ENST00000425718 ANKRD18BA2A2Z9 1011 aa30.1■■■□□ 2.41
APOE-202ENST00000425718 CHRNA5P30532 468 aa30.1■■■□□ 2.41
APOE-202ENST00000425718 IFIT5Q13325 482 aaKnown RBP30.1■■■□□ 2.41
APOE-202ENST00000425718 BBOX1O75936 387 aa30.09■■■□□ 2.41
APOE-202ENST00000425718 GRAPQ13588 217 aa30.09■■■□□ 2.41
APOE-202ENST00000425718 C3orf67Q6ZVT6 689 aa30.09■■■□□ 2.41
APOE-202ENST00000425718 GRAPLQ8TC17 118 aaPredicted RBP30.09■■■□□ 2.41
APOE-202ENST00000425718 KAZALD1Q96I82 304 aa30.09■■■□□ 2.41
APOE-202ENST00000425718 TMX4Q9H1E5 349 aaPredicted RBP30.09■■■□□ 2.41
APOE-202ENST00000425718 MTX1Q13505 466 aa30.08■■■□□ 2.41
APOE-202ENST00000425718 DALRD3Q5D0E6 543 aaKnown RBP30.07■■■□□ 2.4
APOE-202ENST00000425718 EPHA10Q5JZY3 1008 aa30.07■■■□□ 2.4
APOE-202ENST00000425718 ANKRD44Q8N8A2 993 aa30.07■■■□□ 2.4
APOE-202ENST00000425718 NLGN2Q8NFZ4 835 aa30.07■■■□□ 2.4
APOE-202ENST00000425718 CRBNQ96SW2 442 aa30.07■■■□□ 2.4
APOE-202ENST00000425718 GREM2Q9H772 168 aa30.07■■■□□ 2.4
APOE-202ENST00000425718 NEFLP07196 543 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 KCNA3P22001 575 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 ITGA6P23229 1130 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 IGHMBP2P38935 993 aaKnown RBP30.06■■■□□ 2.4
APOE-202ENST00000425718 FAM161AQ3B820 660 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 TAF7LQ5H9L4 462 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 SOGA3Q5TF21 947 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 ANKRD18AQ8IVF6 992 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 TAF1P21675 1872 aa30.06■■■□□ 2.4
APOE-202ENST00000425718 GRIPAP1Q4V328 841 aa30.05■■■□□ 2.4
APOE-202ENST00000425718 RPAP2Q8IXW5 612 aaPredicted RBP30.05■■■□□ 2.4
APOE-202ENST00000425718 SLX4Q8IY92 1834 aa30.05■■■□□ 2.4
APOE-202ENST00000425718 RPS8P62241 208 aaKnown RBP30.04■■■□□ 2.4
APOE-202ENST00000425718 CC2D2BQ6DHV5 1058 aa30.04■■■□□ 2.4
APOE-202ENST00000425718 SPEF2Q9C093 1822 aa30.03■■■□□ 2.4
APOE-202ENST00000425718 HMMRO75330 724 aa30.03■■■□□ 2.4
APOE-202ENST00000425718 CCDC85AQ96PX6 553 aaPredicted RBP30.03■■■□□ 2.4
APOE-202ENST00000425718 PRPF40BQ6NWY9 871 aaKnown RBP30.02■■■□□ 2.4
APOE-202ENST00000425718 MPHOSPH8Q99549 860 aa30.02■■■□□ 2.4
APOE-202ENST00000425718 FBXO3Q9UK99 471 aa30.02■■■□□ 2.4
APOE-202ENST00000425718 PPEF1O14829 653 aaPredicted RBP30.01■■■□□ 2.39
APOE-202ENST00000425718 SRGAP3O43295 1099 aa30.01■■■□□ 2.39
APOE-202ENST00000425718 ATP8B2P98198 1209 aa30.01■■■□□ 2.39
APOE-202ENST00000425718 SEC31BQ9NQW1 1179 aa30■■■□□ 2.39
APOE-202ENST00000425718 DCAF8L1A6NGE4 600 aa29.99■■■□□ 2.39
APOE-202ENST00000425718 C1orf115Q9H7X2 142 aa29.99■■■□□ 2.39
APOE-202ENST00000425718 BSDC1Q9NW68 430 aaPredicted RBP29.99■■■□□ 2.39
APOE-202ENST00000425718 CEP85Q6P2H3 762 aa29.98■■■□□ 2.39
APOE-202ENST00000425718 CELF1Q92879 486 aaKnown RBP29.98■■■□□ 2.39
APOE-202ENST00000425718 BCS1LQ9Y276 419 aa29.98■■■□□ 2.39
APOE-202ENST00000425718 LRRC37AA6NMS7 1700 aa29.98■■■□□ 2.39
APOE-202ENST00000425718 SRCAPQ6ZRS2 3230 aa29.97■■■□□ 2.39
APOE-202ENST00000425718 SP8Q8IXZ3 490 aa29.97■■■□□ 2.39
APOE-202ENST00000425718 ATP6V0A2Q9Y487 856 aa29.97■■■□□ 2.39
APOE-202ENST00000425718 SSH3Q8TE77 659 aa29.96■■■□□ 2.39
APOE-202ENST00000425718 LDHAL6AQ6ZMR3 332 aa29.95■■■□□ 2.39
APOE-202ENST00000425718 COPRSQ9NQ92 184 aa29.95■■■□□ 2.39
APOE-202ENST00000425718 CCDC93Q567U6 631 aa29.94■■■□□ 2.38
APOE-202ENST00000425718 EXOC6Q8TAG9 804 aa29.94■■■□□ 2.38
APOE-202ENST00000425718 CNNM1Q9NRU3 951 aa29.94■■■□□ 2.38
APOE-202ENST00000425718 RFX5P48382 616 aaPredicted RBP29.93■■■□□ 2.38
APOE-202ENST00000425718 POLA2Q14181 598 aa29.93■■■□□ 2.38
APOE-202ENST00000425718 RTKN2Q8IZC4 609 aa29.93■■■□□ 2.38
APOE-202ENST00000425718 GRIN3BO60391 1043 aa29.92■■■□□ 2.38
APOE-202ENST00000425718 CIAO1O76071 339 aa29.92■■■□□ 2.38
APOE-202ENST00000425718 PTPN12Q05209 780 aaKnown RBP29.92■■■□□ 2.38
APOE-202ENST00000425718 FER1L6Q2WGJ9 1857 aa29.92■■■□□ 2.38
APOE-202ENST00000425718 ANKRD2Q9GZV1 360 aa29.92■■■□□ 2.38
APOE-202ENST00000425718 PNMA6EA0A0J9YXQ4 647 aa29.91■■■□□ 2.38
APOE-202ENST00000425718 GPR162Q16538 588 aa29.91■■■□□ 2.38
APOE-202ENST00000425718 HSP90AB4PQ58FF6 505 aa29.91■■■□□ 2.38
APOE-202ENST00000425718 C7orf43Q8WVR3 580 aa29.91■■■□□ 2.38
APOE-202ENST00000425718 MROH5Q6ZUA9 1318 aa29.91■■■□□ 2.38
APOE-202ENST00000425718 C21orf2O43822 256 aa29.9■■■□□ 2.38
APOE-202ENST00000425718 EYA2O00167 538 aa29.89■■■□□ 2.38
APOE-202ENST00000425718 IRX6P78412 446 aaPredicted RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms