RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ATP5JP18859 108 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 GJB2P29033 226 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
UBR4-207ENST00000425413 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
UBR4-207ENST00000425413 RNF214Q8ND24 703 aa13.85□□□□□ -0.19
UBR4-207ENST00000425413 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
UBR4-207ENST00000425413 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
UBR4-207ENST00000425413 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
UBR4-207ENST00000425413 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
UBR4-207ENST00000425413 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 FIBPO43427 364 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 STX6O43752 255 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.84□□□□□ -0.19
UBR4-207ENST00000425413 TAF5LO75529 589 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 FERMT3Q86UX7 667 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 RBSNQ9H1K0 784 aa13.84□□□□□ -0.19
UBR4-207ENST00000425413 ST3GAL1Q11201 340 aa13.83□□□□□ -0.19
UBR4-207ENST00000425413 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.19
UBR4-207ENST00000425413 COL15A1P39059 1388 aa13.83□□□□□ -0.19
UBR4-207ENST00000425413 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
UBR4-207ENST00000425413 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
UBR4-207ENST00000425413 RNF20Q5VTR2 975 aa13.83□□□□□ -0.2
UBR4-207ENST00000425413 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
UBR4-207ENST00000425413 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
UBR4-207ENST00000425413 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
UBR4-207ENST00000425413 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
UBR4-207ENST00000425413 ADAMTS2O95450 1211 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBR4-207ENST00000425413 GORABQ5T7V8 394 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 ISY1Q9ULR0 285 aaKnown RBP13.82□□□□□ -0.2
UBR4-207ENST00000425413 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 A0A1B0GUL7 405 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 HLFQ16534 295 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 FAM173BQ6P4H8 233 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 HAUS7Q99871 368 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
UBR4-207ENST00000425413 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 A0A0G2JLW4 131 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 EYA2O00167 538 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 ZNF609O15014 1411 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
UBR4-207ENST00000425413 PSMA5P28066 241 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 ADORA1P30542 326 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 ZNF445P59923 1031 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 TM6SF1Q9BZW5 370 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 PAG1Q9NWQ8 432 aa13.81□□□□□ -0.2
UBR4-207ENST00000425413 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 FGD1P98174 961 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 ANP32BQ92688 251 aaKnown RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 CEP126Q9P2H0 1117 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 FOSBP53539 338 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 ARFGEF2Q9Y6D5 1785 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 STARD3NLO95772 234 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 F13A1P00488 732 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
UBR4-207ENST00000425413 MCMDC2Q4G0Z9 681 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 KCNB2Q92953 911 aa13.8□□□□□ -0.2
UBR4-207ENST00000425413 GLI3P10071 1580 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 MBD3O95983 291 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
UBR4-207ENST00000425413 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 CYP21A2P08686 494 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
UBR4-207ENST00000425413 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
UBR4-207ENST00000425413 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
UBR4-207ENST00000425413 SH2B1Q9NRF2 756 aaPredicted RBP13.79□□□□□ -0.2
UBR4-207ENST00000425413 MTMR6Q9Y217 621 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
UBR4-207ENST00000425413 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
UBR4-207ENST00000425413 JAK2O60674 1132 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 ABCC6O95255 1503 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 SCARF1Q14162 830 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 TTLL5Q6EMB2 1281 aa13.77□□□□□ -0.21
UBR4-207ENST00000425413 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms