RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
TPM3P9-201ENST00000424846 A0A087WWV3 80 aa16.84■□□□□ 0.29
TPM3P9-201ENST00000424846 TAF5LO75529 589 aa16.84■□□□□ 0.29
TPM3P9-201ENST00000424846 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
TPM3P9-201ENST00000424846 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
TPM3P9-201ENST00000424846 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
TPM3P9-201ENST00000424846 CHD2O14647 1828 aaKnown RBP16.83■□□□□ 0.29
TPM3P9-201ENST00000424846 CCDC186Q7Z3E2 898 aa16.83■□□□□ 0.29
TPM3P9-201ENST00000424846 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.29
TPM3P9-201ENST00000424846 DBNLQ9UJU6 430 aaKnown RBP16.83■□□□□ 0.29
TPM3P9-201ENST00000424846 PSMA5P28066 241 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 CEBPZQ03701 1054 aaKnown RBP16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 UTYO14607 1347 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 GCP02774 474 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 ORAI2Q96SN7 254 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 CCDC94Q9BW85 323 aaPredicted RBP16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 DNAJC25Q9H1X3 360 aa16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
TPM3P9-201ENST00000424846 ELP1O95163 1332 aa16.82■□□□□ 0.28
TPM3P9-201ENST00000424846 BRF1Q92994 677 aa16.82■□□□□ 0.28
TPM3P9-201ENST00000424846 MYD88Q99836 296 aa16.82■□□□□ 0.28
TPM3P9-201ENST00000424846 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 CBX1P83916 185 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 TFCP2Q12800 502 aa16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 MTERF4Q7Z6M4 381 aaKnown RBP16.81■□□□□ 0.28
TPM3P9-201ENST00000424846 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 HIP1O00291 1037 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 RESTQ13127 1097 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 GCKRQ14397 625 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 Q6ZUG5 572 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 ZNF609O15014 1411 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 CYP21A2P08686 494 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 PDCP20941 246 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
TPM3P9-201ENST00000424846 JCADQ9P266 1359 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 ARID5BQ14865 1188 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 C16orf45Q96MC5 204 aaPredicted RBP16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 TRIM5Q9C035 493 aa16.79■□□□□ 0.28
TPM3P9-201ENST00000424846 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 ZNF75DP51815 510 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 SCRN1Q12765 414 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 PLA2G4DQ86XP0 818 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 ERCC4Q92889 916 aaPredicted RBP16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
TPM3P9-201ENST00000424846 ATP5J2-PTCD1G3V325 749 aa16.77■□□□□ 0.28
TPM3P9-201ENST00000424846 PTCD1O75127 700 aaKnown RBP16.77■□□□□ 0.28
TPM3P9-201ENST00000424846 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.28
TPM3P9-201ENST00000424846 ZNF165P49910 485 aa16.77■□□□□ 0.28
TPM3P9-201ENST00000424846 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 TNNI3KQ59H18 835 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 ZNF790Q6PG37 636 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 C11orf57Q6ZUT1 292 aaPredicted RBP16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 C5P01031 1676 aa16.77■□□□□ 0.27
TPM3P9-201ENST00000424846 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 ZNF496Q96IT1 587 aaPredicted RBP16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 TDRD7Q8NHU6 1098 aaKnown RBP16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
TPM3P9-201ENST00000424846 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
TPM3P9-201ENST00000424846 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms