RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 PDE3AQ14432 1141 aa25.94■■□□□ 1.74
PMS1-211ENST00000424766 CCDC152Q4G0S7 254 aa25.94■■□□□ 1.74
PMS1-211ENST00000424766 DDX46Q7L014 1031 aaKnown RBP25.94■■□□□ 1.74
PMS1-211ENST00000424766 TTLL11Q8NHH1 800 aa25.94■■□□□ 1.74
PMS1-211ENST00000424766 CACNA1SQ13698 1873 aa25.94■■□□□ 1.74
PMS1-211ENST00000424766 SLX4Q8IY92 1834 aa25.93■■□□□ 1.74
PMS1-211ENST00000424766 CSF1RP07333 972 aa25.93■■□□□ 1.74
PMS1-211ENST00000424766 FOXO4P98177 505 aa25.93■■□□□ 1.74
PMS1-211ENST00000424766 BCS1LQ9Y276 419 aa25.93■■□□□ 1.74
PMS1-211ENST00000424766 GNAI3P08754 354 aa25.92■■□□□ 1.74
PMS1-211ENST00000424766 PANK1Q8TE04 598 aa25.92■■□□□ 1.74
PMS1-211ENST00000424766 SUCLG2Q96I99 432 aa25.92■■□□□ 1.74
PMS1-211ENST00000424766 TAF1P21675 1872 aa25.91■■□□□ 1.74
PMS1-211ENST00000424766 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
PMS1-211ENST00000424766 UBTFL1P0CB47 393 aaPredicted RBP25.91■■□□□ 1.74
PMS1-211ENST00000424766 GPR162Q16538 588 aa25.91■■□□□ 1.74
PMS1-211ENST00000424766 PRPF40BQ6NWY9 871 aaKnown RBP25.9■■□□□ 1.74
PMS1-211ENST00000424766 ITPRIPQ8IWB1 547 aa25.9■■□□□ 1.74
PMS1-211ENST00000424766 KAZALD1Q96I82 304 aa25.9■■□□□ 1.74
PMS1-211ENST00000424766 MEIS3Q99687 375 aa25.9■■□□□ 1.74
PMS1-211ENST00000424766 WWC3Q9ULE0 1092 aa25.9■■□□□ 1.74
PMS1-211ENST00000424766 RTL9Q8NET4 1388 aa25.9■■□□□ 1.74
PMS1-211ENST00000424766 BBOX1O75936 387 aa25.89■■□□□ 1.74
PMS1-211ENST00000424766 RRP1P56182 461 aaKnown RBP25.89■■□□□ 1.74
PMS1-211ENST00000424766 EPHA10Q5JZY3 1008 aa25.89■■□□□ 1.74
PMS1-211ENST00000424766 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.74
PMS1-211ENST00000424766 YBX3P16989 372 aaKnown RBP eCLIP25.88■■□□□ 1.73
PMS1-211ENST00000424766 GRAPQ13588 217 aa25.88■■□□□ 1.73
PMS1-211ENST00000424766 LMBR1LQ6UX01 489 aa25.88■■□□□ 1.73
PMS1-211ENST00000424766 GRAPLQ8TC17 118 aaPredicted RBP25.88■■□□□ 1.73
PMS1-211ENST00000424766 ZBTB7BO15156 539 aaPredicted RBP25.87■■□□□ 1.73
PMS1-211ENST00000424766 GRIN3BO60391 1043 aa25.86■■□□□ 1.73
PMS1-211ENST00000424766 RPS8P62241 208 aaKnown RBP25.86■■□□□ 1.73
PMS1-211ENST00000424766 MVPQ14764 893 aaKnown RBP25.86■■□□□ 1.73
PMS1-211ENST00000424766 RABL6Q3YEC7 729 aaPredicted RBP25.86■■□□□ 1.73
PMS1-211ENST00000424766 C7orf43Q8WVR3 580 aa25.86■■□□□ 1.73
PMS1-211ENST00000424766 CCDC85AQ96PX6 553 aaPredicted RBP25.86■■□□□ 1.73
PMS1-211ENST00000424766 BICC1Q9H694 974 aaKnown RBP25.86■■□□□ 1.73
PMS1-211ENST00000424766 GREM2Q9H772 168 aa25.86■■□□□ 1.73
PMS1-211ENST00000424766 SEC31BQ9NQW1 1179 aa25.86■■□□□ 1.73
PMS1-211ENST00000424766 C20orf194Q5TEA3 1177 aa25.85■■□□□ 1.73
PMS1-211ENST00000424766 TMC4Q7Z404 712 aa25.85■■□□□ 1.73
PMS1-211ENST00000424766 CDC5LQ99459 802 aaKnown RBP25.85■■□□□ 1.73
PMS1-211ENST00000424766 SOGA3Q5TF21 947 aa25.84■■□□□ 1.73
PMS1-211ENST00000424766 CELF1Q92879 486 aaKnown RBP25.84■■□□□ 1.73
PMS1-211ENST00000424766 CHMP4BQ9H444 224 aaKnown RBP25.84■■□□□ 1.73
PMS1-211ENST00000424766 DDX19BQ9UMR2 479 aa25.84■■□□□ 1.73
PMS1-211ENST00000424766 COG6Q9Y2V7 657 aa25.84■■□□□ 1.73
PMS1-211ENST00000424766 PPEF1O14829 653 aaPredicted RBP25.83■■□□□ 1.73
PMS1-211ENST00000424766 C21orf2O43822 256 aa25.83■■□□□ 1.73
PMS1-211ENST00000424766 ITGA6P23229 1130 aa25.83■■□□□ 1.73
PMS1-211ENST00000424766 CC2D2BQ6DHV5 1058 aa25.83■■□□□ 1.73
PMS1-211ENST00000424766 ANKRD44Q8N8A2 993 aa25.83■■□□□ 1.73
PMS1-211ENST00000424766 LRRFIP2Q9Y608 721 aaKnown RBP25.83■■□□□ 1.73
PMS1-211ENST00000424766 ANKRD18BA2A2Z9 1011 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 GNAI2P04899 355 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 IFIT5Q13325 482 aaKnown RBP25.82■■□□□ 1.72
PMS1-211ENST00000424766 FAM161AQ3B820 660 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 ANKRD18AQ8IVF6 992 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 SP8Q8IXZ3 490 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 CHMP3Q9Y3E7 222 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 ATP6V0A2Q9Y487 856 aa25.82■■□□□ 1.72
PMS1-211ENST00000424766 CCDC57Q2TAC2 916 aa25.81■■□□□ 1.72
PMS1-211ENST00000424766 GRIPAP1Q4V328 841 aa25.81■■□□□ 1.72
PMS1-211ENST00000424766 ZNF219Q9P2Y4 722 aaPredicted RBP25.81■■□□□ 1.72
PMS1-211ENST00000424766 TMX4Q9H1E5 349 aaPredicted RBP25.8■■□□□ 1.72
PMS1-211ENST00000424766 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
PMS1-211ENST00000424766 FER1L6Q2WGJ9 1857 aa25.79■■□□□ 1.72
PMS1-211ENST00000424766 CCDC93Q567U6 631 aa25.79■■□□□ 1.72
PMS1-211ENST00000424766 ARHGAP27Q6ZUM4 889 aa25.79■■□□□ 1.72
PMS1-211ENST00000424766 COL4A1P02462 1669 aa25.78■■□□□ 1.72
PMS1-211ENST00000424766 IGHMBP2P38935 993 aaKnown RBP25.78■■□□□ 1.72
PMS1-211ENST00000424766 RTKN2Q8IZC4 609 aa25.78■■□□□ 1.72
PMS1-211ENST00000424766 BSDC1Q9NW68 430 aaPredicted RBP25.78■■□□□ 1.72
PMS1-211ENST00000424766 SPEF2Q9C093 1822 aa25.77■■□□□ 1.72
PMS1-211ENST00000424766 MTX1Q13505 466 aa25.76■■□□□ 1.71
PMS1-211ENST00000424766 ZBTB40Q9NUA8 1239 aa25.76■■□□□ 1.71
PMS1-211ENST00000424766 LRRC37AA6NMS7 1700 aa25.76■■□□□ 1.71
PMS1-211ENST00000424766 OLFM4Q6UX06 510 aa25.75■■□□□ 1.71
PMS1-211ENST00000424766 MPHOSPH8Q99549 860 aa25.75■■□□□ 1.71
PMS1-211ENST00000424766 TAF7LQ5H9L4 462 aa25.74■■□□□ 1.71
PMS1-211ENST00000424766 LTBP3Q9NS15 1303 aa25.73■■□□□ 1.71
PMS1-211ENST00000424766 RFX5P48382 616 aaPredicted RBP25.73■■□□□ 1.71
PMS1-211ENST00000424766 ZNF594Q96JF6 807 aaPredicted RBP25.73■■□□□ 1.71
PMS1-211ENST00000424766 SBF1O95248 1867 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 CCDC88AQ3V6T2 1871 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 SNED1Q8TER0 1413 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 ATP8B2P98198 1209 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 LDHAL6AQ6ZMR3 332 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 MPNDQ8N594 471 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 PSMD1Q99460 953 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 MINPP1Q9UNW1 487 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 CHD4Q14839 1912 aa25.72■■□□□ 1.71
PMS1-211ENST00000424766 NFKBIEO00221 500 aa25.71■■□□□ 1.71
PMS1-211ENST00000424766 FKBP4Q02790 459 aaKnown RBP eCLIP25.71■■□□□ 1.71
PMS1-211ENST00000424766 SRGAP3O43295 1099 aa25.7■■□□□ 1.7
PMS1-211ENST00000424766 TAOK3Q9H2K8 898 aa25.7■■□□□ 1.7
PMS1-211ENST00000424766 C1orf115Q9H7X2 142 aa25.7■■□□□ 1.7
PMS1-211ENST00000424766 PODXL2Q9NZ53 605 aa25.7■■□□□ 1.7
PMS1-211ENST00000424766 PTPN12Q05209 780 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms