RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 AOC3Q16853 763 aa20.92■□□□□ 0.94
DDR1-234ENST00000424544 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
DDR1-234ENST00000424544 SUPT20HQ8NEM7 779 aa20.92■□□□□ 0.94
DDR1-234ENST00000424544 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
DDR1-234ENST00000424544 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
DDR1-234ENST00000424544 CXCL9Q07325 125 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 KIAA2012Q0VF49 1180 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 NIM1KQ8IY84 436 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 CELF1Q92879 486 aaKnown RBP20.91■□□□□ 0.94
DDR1-234ENST00000424544 ZNRF3Q9ULT6 936 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 GJA3Q9Y6H8 435 aa20.91■□□□□ 0.94
DDR1-234ENST00000424544 TAF1P21675 1872 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 DDX60Q8IY21 1712 aaKnown RBP20.9■□□□□ 0.94
DDR1-234ENST00000424544 EPS15P42566 896 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 EAPPQ56P03 285 aaPredicted RBP20.9■□□□□ 0.94
DDR1-234ENST00000424544 DPP8Q6V1X1 898 aaPredicted RBP20.9■□□□□ 0.94
DDR1-234ENST00000424544 RIC3Q7Z5B4 369 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 CNTROBQ8N137 903 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
DDR1-234ENST00000424544 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
DDR1-234ENST00000424544 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
DDR1-234ENST00000424544 CCER2I3L3R5 266 aa20.88■□□□□ 0.93
DDR1-234ENST00000424544 CCDC30Q5VVM6 783 aa20.88■□□□□ 0.93
DDR1-234ENST00000424544 CCDC191Q8NCU4 936 aa20.88■□□□□ 0.93
DDR1-234ENST00000424544 METTL22Q9BUU2 404 aaPredicted RBP20.88■□□□□ 0.93
DDR1-234ENST00000424544 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
DDR1-234ENST00000424544 GOLGA2Q08379 1002 aa20.87■□□□□ 0.93
DDR1-234ENST00000424544 MAP1SQ66K74 1059 aaPredicted RBP20.87■□□□□ 0.93
DDR1-234ENST00000424544 USP50Q70EL3 339 aaPredicted RBP20.87■□□□□ 0.93
DDR1-234ENST00000424544 DUOX1Q9NRD9 1551 aa20.86■□□□□ 0.93
DDR1-234ENST00000424544 TMEM88BA6NKF7 163 aa20.86■□□□□ 0.93
DDR1-234ENST00000424544 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
DDR1-234ENST00000424544 GPRC5DQ9NZD1 345 aa20.86■□□□□ 0.93
DDR1-234ENST00000424544 COL4A1P02462 1669 aa20.86■□□□□ 0.93
DDR1-234ENST00000424544 IL16Q14005 1332 aa20.85■□□□□ 0.93
DDR1-234ENST00000424544 LRRC37AA6NMS7 1700 aa20.85■□□□□ 0.93
DDR1-234ENST00000424544 YDJCA8MPS7 323 aa20.85■□□□□ 0.93
DDR1-234ENST00000424544 PCCAP05165 728 aaPredicted RBP20.85■□□□□ 0.93
DDR1-234ENST00000424544 LMOD1P29536 600 aaPredicted RBP20.85■□□□□ 0.93
DDR1-234ENST00000424544 RPS8P62241 208 aaKnown RBP20.85■□□□□ 0.93
DDR1-234ENST00000424544 TSR2Q969E8 191 aaKnown RBP20.85■□□□□ 0.93
DDR1-234ENST00000424544 MYD88Q99836 296 aa20.85■□□□□ 0.93
DDR1-234ENST00000424544 CNTNAP1P78357 1384 aa20.85■□□□□ 0.93
DDR1-234ENST00000424544 COL13A1Q5TAT6 717 aaPredicted RBP20.84■□□□□ 0.93
DDR1-234ENST00000424544 KSR2Q6VAB6 950 aa20.84■□□□□ 0.93
DDR1-234ENST00000424544 POLLQ9UGP5 575 aa20.84■□□□□ 0.93
DDR1-234ENST00000424544 MKRN1Q9UHC7 482 aaKnown RBP20.84■□□□□ 0.93
DDR1-234ENST00000424544 PGAP2Q9UHJ9 254 aa20.84■□□□□ 0.93
DDR1-234ENST00000424544 CIAPIN1Q6FI81 312 aa20.83■□□□□ 0.93
DDR1-234ENST00000424544 ADARB2Q9NS39 739 aaKnown RBP20.83■□□□□ 0.93
DDR1-234ENST00000424544 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.93
DDR1-234ENST00000424544 DDX58O95786 925 aaKnown RBP20.82■□□□□ 0.92
DDR1-234ENST00000424544 IGKV5-2P06315 115 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 HSPA1AP0DMV8 641 aaKnown RBP20.82■□□□□ 0.92
DDR1-234ENST00000424544 HSPA1BP0DMV9 641 aaKnown RBP20.82■□□□□ 0.92
DDR1-234ENST00000424544 HSP90B1P14625 803 aaKnown RBP20.82■□□□□ 0.92
DDR1-234ENST00000424544 GPSM2P81274 684 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 CWC25Q9NXE8 425 aaPredicted RBP20.82■□□□□ 0.92
DDR1-234ENST00000424544 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
DDR1-234ENST00000424544 PI4KAP2A4QPH2 592 aa20.81■□□□□ 0.92
DDR1-234ENST00000424544 RASSF10A6NK89 507 aa20.81■□□□□ 0.92
DDR1-234ENST00000424544 PDE8AO60658 829 aa20.81■□□□□ 0.92
DDR1-234ENST00000424544 GMPSP49915 693 aaPredicted RBP20.81■□□□□ 0.92
DDR1-234ENST00000424544 WASHC4Q2M389 1173 aa20.81■□□□□ 0.92
DDR1-234ENST00000424544 PI4KAP1Q8N8J0 262 aa20.81■□□□□ 0.92
DDR1-234ENST00000424544 CDHR2Q9BYE9 1310 aa20.8■□□□□ 0.92
DDR1-234ENST00000424544 RAD17O75943 681 aa20.8■□□□□ 0.92
DDR1-234ENST00000424544 TNIP1Q15025 636 aa20.8■□□□□ 0.92
DDR1-234ENST00000424544 TWISTNBQ3B726 338 aaPredicted RBP20.8■□□□□ 0.92
DDR1-234ENST00000424544 G2E3Q7L622 706 aa20.8■□□□□ 0.92
DDR1-234ENST00000424544 TBC1D16Q8TBP0 767 aa20.8■□□□□ 0.92
DDR1-234ENST00000424544 JARID2Q92833 1246 aaPredicted RBP20.8■□□□□ 0.92
DDR1-234ENST00000424544 VEGFBP49765 207 aa20.79■□□□□ 0.92
DDR1-234ENST00000424544 HIRAP54198 1017 aaPredicted RBP20.79■□□□□ 0.92
DDR1-234ENST00000424544 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.923e-7■■■□□ 15.5
DDR1-234ENST00000424544 WDR63Q8IWG1 891 aa20.79■□□□□ 0.92
DDR1-234ENST00000424544 CST9Q5W186 159 aa20.78■□□□□ 0.92
DDR1-234ENST00000424544 ZC3H15Q8WU90 426 aaKnown RBP20.78■□□□□ 0.92
DDR1-234ENST00000424544 DPF2Q92785 391 aa20.78■□□□□ 0.92
DDR1-234ENST00000424544 VAMP4O75379 141 aa20.77■□□□□ 0.92
DDR1-234ENST00000424544 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
DDR1-234ENST00000424544 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
DDR1-234ENST00000424544 CCDC152Q4G0S7 254 aa20.77■□□□□ 0.92
DDR1-234ENST00000424544 KCNQ5Q9NR82 932 aa20.77■□□□□ 0.92
DDR1-234ENST00000424544 CNOT7Q9UIV1 285 aaKnown RBP20.77■□□□□ 0.92
DDR1-234ENST00000424544 H7C1W4 665 aa20.76■□□□□ 0.91
DDR1-234ENST00000424544 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
DDR1-234ENST00000424544 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
DDR1-234ENST00000424544 SHTN1A0MZ66 631 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 NEURL1BA8MQ27 555 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 C6orf229H3BNL8 230 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 PSMD14O00487 310 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 RIMBP2O15034 1052 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 DBNDD1Q9H9R9 158 aa20.75■□□□□ 0.91
DDR1-234ENST00000424544 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms