RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 C21orf2O43822 256 aa32■■■□□ 2.71
TSPAN3-203ENST00000424443 INTS3Q68E01 1043 aaKnown RBP32■■■□□ 2.71
TSPAN3-203ENST00000424443 CCDC85AQ96PX6 553 aaPredicted RBP32■■■□□ 2.71
TSPAN3-203ENST00000424443 ARHGAP27Q6ZUM4 889 aa31.99■■■□□ 2.71
TSPAN3-203ENST00000424443 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.99■■■□□ 2.71
TSPAN3-203ENST00000424443 TMX4Q9H1E5 349 aaPredicted RBP31.99■■■□□ 2.71
TSPAN3-203ENST00000424443 TNNQ9UQP3 1299 aa31.99■■■□□ 2.71
TSPAN3-203ENST00000424443 NBPF7P0C2Y1 421 aaPredicted RBP31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 MYH3P11055 1940 aa31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 MS4A1P11836 297 aa31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 SOGA3Q5TF21 947 aa31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 SLX4Q8IY92 1834 aa31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 DZIP1LQ8IYY4 767 aaKnown RBP31.98■■■□□ 2.71
TSPAN3-203ENST00000424443 UTYO14607 1347 aa31.97■■■□□ 2.71
TSPAN3-203ENST00000424443 GRAPQ13588 217 aa31.97■■■□□ 2.71
TSPAN3-203ENST00000424443 GRAPLQ8TC17 118 aaPredicted RBP31.97■■■□□ 2.71
TSPAN3-203ENST00000424443 USP44Q9H0E7 712 aa31.97■■■□□ 2.71
TSPAN3-203ENST00000424443 PPEF1O14829 653 aaPredicted RBP31.96■■■□□ 2.71
TSPAN3-203ENST00000424443 TTLL11Q8NHH1 800 aa31.96■■■□□ 2.71
TSPAN3-203ENST00000424443 BBOX1O75936 387 aa31.95■■■□□ 2.71
TSPAN3-203ENST00000424443 UBTFL1P0CB47 393 aaPredicted RBP31.94■■■□□ 2.7
TSPAN3-203ENST00000424443 TMEM57Q8N5G2 664 aa31.94■■■□□ 2.7
TSPAN3-203ENST00000424443 SUCLG2Q96I99 432 aa31.94■■■□□ 2.7
TSPAN3-203ENST00000424443 HDAC5Q9UQL6 1122 aa31.94■■■□□ 2.7
TSPAN3-203ENST00000424443 CHMP3Q9Y3E7 222 aa31.94■■■□□ 2.7
TSPAN3-203ENST00000424443 CCDC93Q567U6 631 aa31.93■■■□□ 2.7
TSPAN3-203ENST00000424443 CDC5LQ99459 802 aaKnown RBP31.92■■■□□ 2.7
TSPAN3-203ENST00000424443 GREM2Q9H772 168 aa31.92■■■□□ 2.7
TSPAN3-203ENST00000424443 SEC31BQ9NQW1 1179 aa31.92■■■□□ 2.7
TSPAN3-203ENST00000424443 CSF1RP07333 972 aa31.91■■■□□ 2.7
TSPAN3-203ENST00000424443 FOXO4P98177 505 aa31.91■■■□□ 2.7
TSPAN3-203ENST00000424443 TMC4Q7Z404 712 aa31.91■■■□□ 2.7
TSPAN3-203ENST00000424443 CELF1Q92879 486 aaKnown RBP31.91■■■□□ 2.7
TSPAN3-203ENST00000424443 UTRNP46939 3433 aa31.91■■■□□ 2.7
TSPAN3-203ENST00000424443 PLIN1O60240 522 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 RPS8P62241 208 aaKnown RBP31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 CC2D2BQ6DHV5 1058 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 LMBR1LQ6UX01 489 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 ITPRIPQ8IWB1 547 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 C7orf43Q8WVR3 580 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 GNAI3P08754 354 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 ANKRD18AQ8IVF6 992 aa31.9■■■□□ 2.7
TSPAN3-203ENST00000424443 RTL9Q8NET4 1388 aa31.89■■■□□ 2.7
TSPAN3-203ENST00000424443 ATP6V0A2Q9Y487 856 aa31.89■■■□□ 2.7
TSPAN3-203ENST00000424443 TAF1P21675 1872 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 ITGA6P23229 1130 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 FAM161AQ3B820 660 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 EPHA10Q5JZY3 1008 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 RTKN2Q8IZC4 609 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 MEIS3Q99687 375 aa31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 BICC1Q9H694 974 aaKnown RBP31.88■■■□□ 2.69
TSPAN3-203ENST00000424443 RLBP1P12271 317 aa31.87■■■□□ 2.69
TSPAN3-203ENST00000424443 OLFM4Q6UX06 510 aa31.87■■■□□ 2.69
TSPAN3-203ENST00000424443 SP8Q8IXZ3 490 aa31.87■■■□□ 2.69
TSPAN3-203ENST00000424443 ANKRD18BA2A2Z9 1011 aa31.86■■■□□ 2.69
TSPAN3-203ENST00000424443 IFIT5Q13325 482 aaKnown RBP31.86■■■□□ 2.69
TSPAN3-203ENST00000424443 CCDC57Q2TAC2 916 aa31.86■■■□□ 2.69
TSPAN3-203ENST00000424443 GRIPAP1Q4V328 841 aa31.86■■■□□ 2.69
TSPAN3-203ENST00000424443 PANK1Q8TE04 598 aa31.86■■■□□ 2.69
TSPAN3-203ENST00000424443 KAZALD1Q96I82 304 aa31.85■■■□□ 2.69
TSPAN3-203ENST00000424443 IGHMBP2P38935 993 aaKnown RBP31.85■■■□□ 2.69
TSPAN3-203ENST00000424443 TAF7LQ5H9L4 462 aa31.84■■■□□ 2.69
TSPAN3-203ENST00000424443 TAOK3Q9H2K8 898 aa31.84■■■□□ 2.69
TSPAN3-203ENST00000424443 RASSF7Q02833 373 aa31.83■■■□□ 2.69
TSPAN3-203ENST00000424443 MPHOSPH8Q99549 860 aa31.83■■■□□ 2.69
TSPAN3-203ENST00000424443 LRRFIP2Q9Y608 721 aaKnown RBP31.82■■■□□ 2.68
TSPAN3-203ENST00000424443 NFKBIEO00221 500 aa31.81■■■□□ 2.68
TSPAN3-203ENST00000424443 RABL6Q3YEC7 729 aaPredicted RBP31.81■■■□□ 2.68
TSPAN3-203ENST00000424443 FKBP4Q02790 459 aaKnown RBP eCLIP31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 PDE3AQ14432 1141 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 FER1L6Q2WGJ9 1857 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 CHD4Q14839 1912 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 GNAI2P04899 355 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 MPNDQ8N594 471 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 ANKRD44Q8N8A2 993 aa31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 BSDC1Q9NW68 430 aaPredicted RBP31.8■■■□□ 2.68
TSPAN3-203ENST00000424443 DPP8Q6V1X1 898 aaPredicted RBP31.79■■■□□ 2.68
TSPAN3-203ENST00000424443 LTBP3Q9NS15 1303 aa31.79■■■□□ 2.68
TSPAN3-203ENST00000424443 COL4A1P02462 1669 aa31.78■■■□□ 2.68
TSPAN3-203ENST00000424443 LMNB1P20700 586 aa31.78■■■□□ 2.68
TSPAN3-203ENST00000424443 NSFL1CQ9UNZ2 370 aaKnown RBP31.78■■■□□ 2.68
TSPAN3-203ENST00000424443 COG6Q9Y2V7 657 aa31.78■■■□□ 2.68
TSPAN3-203ENST00000424443 RRP1P56182 461 aaKnown RBP31.77■■■□□ 2.68
TSPAN3-203ENST00000424443 MVPQ14764 893 aaKnown RBP31.77■■■□□ 2.68
TSPAN3-203ENST00000424443 SLC51AQ86UW1 340 aa31.77■■■□□ 2.68
TSPAN3-203ENST00000424443 PSMD1Q99460 953 aa31.77■■■□□ 2.68
TSPAN3-203ENST00000424443 RNF181Q9P0P0 153 aa31.76■■■□□ 2.68
TSPAN3-203ENST00000424443 DDX19BQ9UMR2 479 aa31.76■■■□□ 2.68
TSPAN3-203ENST00000424443 SUPT20HQ8NEM7 779 aa31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 CHMP4BQ9H444 224 aaKnown RBP31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 ANKIB1Q9P2G1 1089 aa31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 SPEF2Q9C093 1822 aa31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 ZBTB7BO15156 539 aaPredicted RBP31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 C9orf131Q5VYM1 1079 aa31.75■■■□□ 2.67
TSPAN3-203ENST00000424443 LRRC37AA6NMS7 1700 aa31.74■■■□□ 2.67
TSPAN3-203ENST00000424443 LDHAL6AQ6ZMR3 332 aa31.74■■■□□ 2.67
TSPAN3-203ENST00000424443 ZNF594Q96JF6 807 aaPredicted RBP31.74■■■□□ 2.67
TSPAN3-203ENST00000424443 C20orf194Q5TEA3 1177 aa31.73■■■□□ 2.67
TSPAN3-203ENST00000424443 ZNF277Q9NRM2 450 aaPredicted RBP31.73■■■□□ 2.67
TSPAN3-203ENST00000424443 CNNM1Q9NRU3 951 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms