RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 IRS4O14654 1257 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-214ENST00000423251 CNKSR1Q969H4 720 aa23.74■■□□□ 1.39
MCF2L-214ENST00000423251 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
MCF2L-214ENST00000423251 DICER1Q9UPY3 1922 aaKnown RBP23.74■■□□□ 1.39
MCF2L-214ENST00000423251 SLX4Q8IY92 1834 aa23.73■■□□□ 1.39
MCF2L-214ENST00000423251 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-214ENST00000423251 GLTPD2A6NH11 291 aa23.72■■□□□ 1.39
MCF2L-214ENST00000423251 C21orf2O43822 256 aa23.72■■□□□ 1.39
MCF2L-214ENST00000423251 HOXA10P31260 410 aaPredicted RBP23.72■■□□□ 1.39
MCF2L-214ENST00000423251 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
MCF2L-214ENST00000423251 ALDH1B1P30837 517 aa23.71■■□□□ 1.39
MCF2L-214ENST00000423251 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
MCF2L-214ENST00000423251 RPGRQ92834 1020 aaKnown RBP23.71■■□□□ 1.39
MCF2L-214ENST00000423251 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
MCF2L-214ENST00000423251 SMC1BQ8NDV3 1235 aa23.7■■□□□ 1.38
MCF2L-214ENST00000423251 JARID2Q92833 1246 aaPredicted RBP23.7■■□□□ 1.38
MCF2L-214ENST00000423251 RBM17Q96I25 401 aaKnown RBP23.7■■□□□ 1.38
MCF2L-214ENST00000423251 PDE8AO60658 829 aa23.69■■□□□ 1.38
MCF2L-214ENST00000423251 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
MCF2L-214ENST00000423251 CASP7P55210 303 aa23.69■■□□□ 1.38
MCF2L-214ENST00000423251 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
MCF2L-214ENST00000423251 UBE3BQ7Z3V4 1068 aa23.69■■□□□ 1.38
MCF2L-214ENST00000423251 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
MCF2L-214ENST00000423251 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
MCF2L-214ENST00000423251 VEGFAP15692 232 aaPredicted RBP23.68■■□□□ 1.38
MCF2L-214ENST00000423251 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
MCF2L-214ENST00000423251 KLRG1Q96E93 195 aa23.68■■□□□ 1.38
MCF2L-214ENST00000423251 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
MCF2L-214ENST00000423251 GRM8O00222 908 aa23.67■■□□□ 1.38
MCF2L-214ENST00000423251 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
MCF2L-214ENST00000423251 C9orf78Q9NZ63 289 aaPredicted RBP23.67■■□□□ 1.38
MCF2L-214ENST00000423251 TRIM27P14373 513 aa23.66■■□□□ 1.38
MCF2L-214ENST00000423251 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
MCF2L-214ENST00000423251 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
MCF2L-214ENST00000423251 TAOK3Q9H2K8 898 aa23.65■■□□□ 1.38
MCF2L-214ENST00000423251 DDX60Q8IY21 1712 aaKnown RBP23.64■■□□□ 1.38
MCF2L-214ENST00000423251 UTYO14607 1347 aa23.64■■□□□ 1.38
MCF2L-214ENST00000423251 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
MCF2L-214ENST00000423251 ABCC4O15439 1325 aa23.63■■□□□ 1.37
MCF2L-214ENST00000423251 LTBP3Q9NS15 1303 aa23.63■■□□□ 1.37
MCF2L-214ENST00000423251 POTECB2RU33 542 aa23.63■■□□□ 1.37
MCF2L-214ENST00000423251 BBOX1O75936 387 aa23.63■■□□□ 1.37
MCF2L-214ENST00000423251 CCDC152Q4G0S7 254 aa23.63■■□□□ 1.37
MCF2L-214ENST00000423251 CTSWP56202 376 aa23.62■■□□□ 1.37
MCF2L-214ENST00000423251 TTLL11Q8NHH1 800 aa23.62■■□□□ 1.37
MCF2L-214ENST00000423251 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
MCF2L-214ENST00000423251 USP44Q9H0E7 712 aa23.62■■□□□ 1.37
MCF2L-214ENST00000423251 LAMB2P55268 1798 aa23.61■■□□□ 1.37
MCF2L-214ENST00000423251 NBPF7P0C2Y1 421 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-214ENST00000423251 SOGA3Q5TF21 947 aa23.61■■□□□ 1.37
MCF2L-214ENST00000423251 DPY19L2Q6NUT2 758 aa23.61■■□□□ 1.37
MCF2L-214ENST00000423251 CSF1RP07333 972 aa23.6■■□□□ 1.37
MCF2L-214ENST00000423251 GRAPQ13588 217 aa23.6■■□□□ 1.37
MCF2L-214ENST00000423251 JMYQ8N9B5 988 aa23.6■■□□□ 1.37
MCF2L-214ENST00000423251 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-214ENST00000423251 FOXO4P98177 505 aa23.59■■□□□ 1.37
MCF2L-214ENST00000423251 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
MCF2L-214ENST00000423251 TNNQ9UQP3 1299 aa23.59■■□□□ 1.37
MCF2L-214ENST00000423251 CC2D2BQ6DHV5 1058 aa23.58■■□□□ 1.37
MCF2L-214ENST00000423251 TMC4Q7Z404 712 aa23.58■■□□□ 1.37
MCF2L-214ENST00000423251 DZIP1LQ8IYY4 767 aaKnown RBP23.58■■□□□ 1.37
MCF2L-214ENST00000423251 RTL9Q8NET4 1388 aa23.57■■□□□ 1.36
MCF2L-214ENST00000423251 PPEF1O14829 653 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-214ENST00000423251 MS4A1P11836 297 aa23.57■■□□□ 1.36
MCF2L-214ENST00000423251 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
MCF2L-214ENST00000423251 GRIPAP1Q4V328 841 aa23.57■■□□□ 1.36
MCF2L-214ENST00000423251 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
MCF2L-214ENST00000423251 DDNO94850 711 aaPredicted RBP23.56■■□□□ 1.36
MCF2L-214ENST00000423251 CCDC93Q567U6 631 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 SP8Q8IXZ3 490 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
MCF2L-214ENST00000423251 RTKN2Q8IZC4 609 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 KAZALD1Q96I82 304 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 SUCLG2Q96I99 432 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
MCF2L-214ENST00000423251 GREM2Q9H772 168 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 SEC31BQ9NQW1 1179 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 ATP6V0A2Q9Y487 856 aa23.56■■□□□ 1.36
MCF2L-214ENST00000423251 EPHA10Q5JZY3 1008 aa23.55■■□□□ 1.36
MCF2L-214ENST00000423251 TMEM57Q8N5G2 664 aa23.55■■□□□ 1.36
MCF2L-214ENST00000423251 CELF1Q92879 486 aaKnown RBP23.55■■□□□ 1.36
MCF2L-214ENST00000423251 TMX4Q9H1E5 349 aaPredicted RBP23.55■■□□□ 1.36
MCF2L-214ENST00000423251 LMBR1LQ6UX01 489 aa23.54■■□□□ 1.36
MCF2L-214ENST00000423251 OLFM4Q6UX06 510 aa23.54■■□□□ 1.36
MCF2L-214ENST00000423251 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.54■■□□□ 1.36
MCF2L-214ENST00000423251 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
MCF2L-214ENST00000423251 MYH3P11055 1940 aa23.53■■□□□ 1.36
MCF2L-214ENST00000423251 GNAI3P08754 354 aa23.53■■□□□ 1.36
MCF2L-214ENST00000423251 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
MCF2L-214ENST00000423251 POTEIP0CG38 1075 aa23.53■■□□□ 1.36
MCF2L-214ENST00000423251 POTEJP0CG39 1038 aa23.53■■□□□ 1.36
MCF2L-214ENST00000423251 PCNTO95613 3336 aa23.53■■□□□ 1.36
MCF2L-214ENST00000423251 RLBP1P12271 317 aa23.52■■□□□ 1.36
MCF2L-214ENST00000423251 ITGA6P23229 1130 aa23.52■■□□□ 1.36
MCF2L-214ENST00000423251 RABL6Q3YEC7 729 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-214ENST00000423251 ANKRD18AQ8IVF6 992 aa23.52■■□□□ 1.36
MCF2L-214ENST00000423251 SCN4AP35499 1836 aa23.52■■□□□ 1.36
MCF2L-214ENST00000423251 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
MCF2L-214ENST00000423251 IFIT5Q13325 482 aaKnown RBP23.51■■□□□ 1.35
MCF2L-214ENST00000423251 FAM161AQ3B820 660 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms