RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 DDIT3P35638 169 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 IL17RAQ96F46 866 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 NEUROD6Q96NK8 337 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 LSG1Q9H089 658 aaKnown RBP10.89□□□□□ -0.67
SNX20-203ENST00000423026 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 ANKRD36CQ5JPF3 1778 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
SNX20-203ENST00000423026 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
SNX20-203ENST00000423026 ATG9AQ7Z3C6 839 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 IL25Q9H293 177 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
SNX20-203ENST00000423026 SPATA31A6Q5VVP1 1343 aa10.88□□□□□ -0.67
SNX20-203ENST00000423026 CSF1RP07333 972 aa10.88□□□□□ -0.67
SNX20-203ENST00000423026 EIF5P55010 431 aaKnown RBP10.88□□□□□ -0.67
SNX20-203ENST00000423026 ZNF594Q96JF6 807 aaPredicted RBP10.88□□□□□ -0.67
SNX20-203ENST00000423026 CWC22Q9HCG8 908 aaKnown RBP10.88□□□□□ -0.67
SNX20-203ENST00000423026 TRMT112Q9UI30 125 aaKnown RBP10.88□□□□□ -0.67
SNX20-203ENST00000423026 PALD1Q9ULE6 856 aa10.88□□□□□ -0.67
SNX20-203ENST00000423026 PALLDQ8WX93 1383 aa10.88□□□□□ -0.67
SNX20-203ENST00000423026 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
SNX20-203ENST00000423026 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
SNX20-203ENST00000423026 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
SNX20-203ENST00000423026 AKAP2Q9Y2D5 859 aa10.87□□□□□ -0.67
SNX20-203ENST00000423026 CLCN1P35523 988 aa10.87□□□□□ -0.67
SNX20-203ENST00000423026 KCNJ4P48050 445 aa10.87□□□□□ -0.67
SNX20-203ENST00000423026 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
SNX20-203ENST00000423026 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
SNX20-203ENST00000423026 HAUS7Q99871 368 aa10.87□□□□□ -0.67
SNX20-203ENST00000423026 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 MYH3P11055 1940 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 IRS4O14654 1257 aaPredicted RBP10.86□□□□□ -0.67
SNX20-203ENST00000423026 MCM4P33991 863 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 GBP4Q96PP9 640 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 DNAJC2Q99543 621 aaKnown RBP10.86□□□□□ -0.67
SNX20-203ENST00000423026 USP21Q9UK80 565 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 RFX7Q2KHR2 1363 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 PDE8AO60658 829 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 ZKSCAN1P17029 563 aaPredicted RBP10.86□□□□□ -0.67
SNX20-203ENST00000423026 TIMM10P62072 90 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 NUCB2P80303 420 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 RAB3GAP1Q15042 981 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 TICAM2Q86XR7 235 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 ZNF34Q8IZ26 560 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
SNX20-203ENST00000423026 SNX14Q9Y5W7 946 aa10.86□□□□□ -0.67
SNX20-203ENST00000423026 CCDC171Q6TFL3 1326 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 KCNQ2O43526 872 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
SNX20-203ENST00000423026 CTSWP56202 376 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 ITPK1Q13572 414 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 GORABQ5T7V8 394 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 AK7Q96M32 723 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 PUS3Q9BZE2 481 aaKnown RBP10.85□□□□□ -0.67
SNX20-203ENST00000423026 SNRKQ9NRH2 765 aa10.85□□□□□ -0.67
SNX20-203ENST00000423026 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 ITGA6P23229 1130 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 HSPA1LP34931 641 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 PTH1RQ03431 593 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 PARP10Q53GL7 1025 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 CCDC158Q5M9N0 1113 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 MEX3CQ5U5Q3 659 aaKnown RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 RNF20Q5VTR2 975 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 LDHAL6AQ6ZMR3 332 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 TNPO1Q92973 898 aaKnown RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 TMX3Q96JJ7 454 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 UPF3BQ9BZI7 483 aaKnown RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 ZNF609O15014 1411 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 A0A0D9SFI3 127 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 IFIT1P09914 478 aaKnown RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 PRPF40BQ6NWY9 871 aaKnown RBP10.84□□□□□ -0.67
SNX20-203ENST00000423026 SYNE4Q8N205 404 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNX20-203ENST00000423026 MAP4K1Q92918 833 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 CNNM1Q9NRU3 951 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
SNX20-203ENST00000423026 PTMSP20962 102 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 KBTBD3Q8NAB2 608 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 EDC3Q96F86 508 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 UTP14AQ9BVJ6 771 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 GREM2Q9H772 168 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 PAG1Q9NWQ8 432 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 RBM8AQ9Y5S9 174 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 RREB1Q92766 1687 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 GOLGA6L3A6NEY3 463 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 CAMTA2O94983 1202 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 NECTIN1Q15223 517 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 METTL24Q5JXM2 366 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 TTC39AQ5SRH9 613 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms