RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
ECHDC3-203ENST00000422887 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.4
ECHDC3-203ENST00000422887 H0YIN7 160 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 KCNA3P22001 575 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 NLGN2Q8NFZ4 835 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 MEIS3Q99687 375 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
ECHDC3-203ENST00000422887 GNAI2P04899 355 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 SRGNP10124 158 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 NPR1P16066 1061 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 AAMPQ13685 434 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 STYK1Q6J9G0 422 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 RPGRQ92834 1020 aaKnown RBP12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 MASTLQ96GX5 879 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
ECHDC3-203ENST00000422887 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 CCDC24Q8N4L8 307 aa12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 ARAP2Q8WZ64 1704 aa12.5□□□□□ -0.41
ECHDC3-203ENST00000422887 CSF1RP07333 972 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 CNKSR1Q969H4 720 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 SUCLG2Q96I99 432 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
ECHDC3-203ENST00000422887 DPEP1P16444 411 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 FOXO4P98177 505 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 MTX1Q13505 466 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 PIM2Q9P1W9 311 aa12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 LRRFIP2Q9Y608 721 aaKnown RBP12.48□□□□□ -0.41
ECHDC3-203ENST00000422887 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 CHRNA5P30532 468 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 GRAPQ13588 217 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
ECHDC3-203ENST00000422887 A0A0G2JLW4 131 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 DALRD3Q5D0E6 543 aaKnown RBP12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 ANKRD44Q8N8A2 993 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 GREM2Q9H772 168 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.41
ECHDC3-203ENST00000422887 BBOX1O75936 387 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 ITGA6P23229 1130 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
ECHDC3-203ENST00000422887 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 COL4A5P29400 1685 aa12.44□□□□□ -0.42
ECHDC3-203ENST00000422887 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 HMMRO75330 724 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 NEFLP07196 543 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 SLC51AQ86UW1 340 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
ECHDC3-203ENST00000422887 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 MPHOSPH8Q99549 860 aa12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
ECHDC3-203ENST00000422887 ATP8B2P98198 1209 aa12.41□□□□□ -0.42
ECHDC3-203ENST00000422887 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
ECHDC3-203ENST00000422887 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
ECHDC3-203ENST00000422887 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms