RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 POTEB2H3BUK9 544 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 CUL7Q14999 1698 aa20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 SYT10Q6XYQ8 523 aa20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 UBA7P41226 1012 aa20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 RBM5P52756 815 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
TRAPPC10-203ENST00000422875 CREB3L3Q68CJ9 461 aa20.14■□□□□ 0.82
TRAPPC10-203ENST00000422875 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.82
TRAPPC10-203ENST00000422875 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
TRAPPC10-203ENST00000422875 IFNKQ9P0W0 207 aa20.14■□□□□ 0.81
TRAPPC10-203ENST00000422875 GRM8O00222 908 aa20.14■□□□□ 0.81
TRAPPC10-203ENST00000422875 GOPCQ9HD26 462 aa20.14■□□□□ 0.81
TRAPPC10-203ENST00000422875 TMOD3Q9NYL9 352 aa20.14■□□□□ 0.81
TRAPPC10-203ENST00000422875 ANKRD18BA2A2Z9 1011 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 CAVIN4Q5BKX8 364 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 MYO1BO43795 1136 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 MTHFSDQ2M296 383 aaKnown RBP20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 XAGE3Q8WTP9 111 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 SPTLC2O15270 562 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 SLC39A6Q13433 755 aa20.13■□□□□ 0.81
TRAPPC10-203ENST00000422875 PHACTR2O75167 634 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 RSPH14Q9UHP6 348 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 GPATCH11Q8N954 259 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 CWC25Q9NXE8 425 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 TMCO5BA8MYB1 307 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 ZBTB43O43298 467 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 AKR1B10O60218 316 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 LMBR1LQ6UX01 489 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 KLHL34Q8N239 644 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 DRC1Q96MC2 740 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 TSG101Q99816 390 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 CWF19L2Q2TBE0 894 aaKnown RBP20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 G2E3Q7L622 706 aa20.12■□□□□ 0.81
TRAPPC10-203ENST00000422875 CTAGE15A4D2H0 777 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 CTAGE8P0CG41 777 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■□□ 19.2
TRAPPC10-203ENST00000422875 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 CTAGE6Q86UF2 777 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 CTAGE4Q8IX94 777 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 SLC5A1P13866 664 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 TRIM21P19474 475 aaKnown RBP20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 KARSQ15046 597 aaKnown RBP20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 KANK3Q6NY19 840 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 TSC1Q92574 1164 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 RTL1A6NKG5 1358 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 ZNF445P59923 1031 aa20.11■□□□□ 0.81
TRAPPC10-203ENST00000422875 MAATS1Q7Z4T9 603 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 VPS36Q86VN1 386 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 GADD45BO75293 160 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 GTF3C6Q969F1 213 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 ALS2CR12Q96Q35 445 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 LMBRD1Q9NUN5 540 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 PPP1R12BO60237 982 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 RRAGBQ5VZM2 374 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 TCP11L1Q9NUJ3 509 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 SOS1Q07889 1333 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 NOP2P46087 812 aaKnown RBP20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 LZTFL1Q9NQ48 299 aa20.1■□□□□ 0.81
TRAPPC10-203ENST00000422875 MPHOSPH10O00566 681 aaKnown RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 TCERG1LQ5VWI1 586 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 SPTY2D1Q68D10 685 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 DZIP1Q86YF9 867 aaKnown RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 ZNF444Q8N0Y2 327 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 GTPBP4Q9BZE4 634 aaKnown RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 TMEM63CQ9P1W3 806 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 PTPDC1A2A3K4 754 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 VAT1LQ9HCJ6 419 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 PRPF4BQ13523 1007 aaKnown RBP20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 MACROD2A1Z1Q3 448 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 CAPN2P17655 700 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 MNAT1P51948 309 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 STX17P56962 302 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 RUFY3Q7L099 469 aa20.09■□□□□ 0.81
TRAPPC10-203ENST00000422875 NUP160Q12769 1436 aa20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 A0A1B0GVL5 298 aa20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 GSTTP1A0A1W2PQM5 241 aa20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 NUTM2BA6NNL0 878 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 NUTM2EB1AL46 878 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 CCDC40Q4G0X9 1142 aa20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 KSR2Q6VAB6 950 aa20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 NUTM2AQ8IVF1 878 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC10-203ENST00000422875 GOLGA6L10A0A0M3HER8 536 aa20.08■□□□□ 0.8
TRAPPC10-203ENST00000422875 PUF60Q9UHX1 559 aaKnown RBP20.08■□□□□ 0.8
TRAPPC10-203ENST00000422875 RAB34Q9BZG1 259 aa20.08■□□□□ 0.8
TRAPPC10-203ENST00000422875 FGFR1OPO95684 399 aaKnown RBP20.07■□□□□ 0.8
TRAPPC10-203ENST00000422875 PRC1O43663 620 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms