RNA–Protein interactions for RNA: ENST00000422728.2

FAM200B-201, Transcript of family with sequence similarity 200 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-201ENST00000422728 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
FAM200B-201ENST00000422728 ZNF530Q6P9A1 599 aaPredicted RBP16.73■□□□□ 0.27
FAM200B-201ENST00000422728 BLOC1S2Q6QNY1 142 aa16.73■□□□□ 0.27
FAM200B-201ENST00000422728 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
FAM200B-201ENST00000422728 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
FAM200B-201ENST00000422728 KCNA6P17658 529 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 GOLGA6L4A6NEF3 574 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 CCDC144BQ3MJ40 725 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
FAM200B-201ENST00000422728 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
FAM200B-201ENST00000422728 COL15A1P39059 1388 aa16.71■□□□□ 0.27
FAM200B-201ENST00000422728 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
FAM200B-201ENST00000422728 ARID5BQ14865 1188 aa16.71■□□□□ 0.27
FAM200B-201ENST00000422728 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.27
FAM200B-201ENST00000422728 DMTNQ08495 405 aa16.71■□□□□ 0.27
FAM200B-201ENST00000422728 ELP1O95163 1332 aa16.71■□□□□ 0.26
FAM200B-201ENST00000422728 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.26
FAM200B-201ENST00000422728 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.26
FAM200B-201ENST00000422728 KSR2Q6VAB6 950 aa16.71■□□□□ 0.26
FAM200B-201ENST00000422728 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.26
FAM200B-201ENST00000422728 BICD2Q8TD16 824 aa16.71■□□□□ 0.26
FAM200B-201ENST00000422728 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 PXDNQ92626 1479 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
FAM200B-201ENST00000422728 ZNF75DP51815 510 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 CACTINQ8WUQ7 758 aaKnown RBP16.7■□□□□ 0.26
FAM200B-201ENST00000422728 ANKRD7Q92527 254 aa16.7■□□□□ 0.26
FAM200B-201ENST00000422728 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
FAM200B-201ENST00000422728 GRM8O00222 908 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 CTIFO43310 598 aaKnown RBP16.69■□□□□ 0.26
FAM200B-201ENST00000422728 ZNF165P49910 485 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
FAM200B-201ENST00000422728 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 PSMA5P28066 241 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 NCBP1Q09161 790 aaKnown RBP16.69■□□□□ 0.26
FAM200B-201ENST00000422728 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 BRF1Q92994 677 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
FAM200B-201ENST00000422728 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 IP6K1Q92551 441 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
FAM200B-201ENST00000422728 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
FAM200B-201ENST00000422728 MED23Q9ULK4 1368 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 NPHP3Q7Z494 1330 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
FAM200B-201ENST00000422728 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
FAM200B-201ENST00000422728 HEG1Q9ULI3 1381 aa16.68■□□□□ 0.26
FAM200B-201ENST00000422728 USP27XA6NNY8 438 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 TAF5LO75529 589 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 IGKV5-2P06315 115 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 TPM3P06753 285 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 PDCP20941 246 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 C11orf57Q6ZUT1 292 aaPredicted RBP16.67■□□□□ 0.26
FAM200B-201ENST00000422728 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
FAM200B-201ENST00000422728 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 TNNT1P13805 278 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 RBM43Q6ZSC3 357 aaKnown RBP16.67■□□□□ 0.26
FAM200B-201ENST00000422728 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
FAM200B-201ENST00000422728 MRC1P22897 1456 aa16.66■□□□□ 0.26
FAM200B-201ENST00000422728 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
FAM200B-201ENST00000422728 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
FAM200B-201ENST00000422728 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
FAM200B-201ENST00000422728 ZNF592Q92610 1267 aa16.66■□□□□ 0.26
FAM200B-201ENST00000422728 MYL6BP14649 208 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 RESTQ13127 1097 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 Q6ZUG5 572 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 DDX19AQ9NUU7 478 aaKnown RBP16.65■□□□□ 0.26
FAM200B-201ENST00000422728 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
FAM200B-201ENST00000422728 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
FAM200B-201ENST00000422728 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
FAM200B-201ENST00000422728 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
FAM200B-201ENST00000422728 PDIA6Q15084 440 aa16.64■□□□□ 0.25
FAM200B-201ENST00000422728 GOLPH3LQ9H4A5 285 aa16.64■□□□□ 0.25
FAM200B-201ENST00000422728 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.64■□□□□ 0.25
FAM200B-201ENST00000422728 V9GYY5 206 aaPredicted RBP16.64■□□□□ 0.25
FAM200B-201ENST00000422728 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
FAM200B-201ENST00000422728 ALS2Q96Q42 1657 aa16.63■□□□□ 0.25
FAM200B-201ENST00000422728 CYP21A2P08686 494 aa16.63■□□□□ 0.25
FAM200B-201ENST00000422728 SCRN1Q12765 414 aa16.63■□□□□ 0.25
FAM200B-201ENST00000422728 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
FAM200B-201ENST00000422728 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
FAM200B-201ENST00000422728 HIP1O00291 1037 aa16.63■□□□□ 0.25
FAM200B-201ENST00000422728 TPD52L1Q16890 204 aaPredicted RBP16.63■□□□□ 0.25
FAM200B-201ENST00000422728 H3BQV1 296 aa16.62■□□□□ 0.25
FAM200B-201ENST00000422728 IQCB1Q15051 598 aa16.62■□□□□ 0.25
FAM200B-201ENST00000422728 UTP14CQ5TAP6 766 aaKnown RBP16.62■□□□□ 0.25
FAM200B-201ENST00000422728 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
FAM200B-201ENST00000422728 STOX1Q6ZVD7 989 aa16.62■□□□□ 0.25
FAM200B-201ENST00000422728 NEK1Q96PY6 1258 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms