RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 GIGYF1O75420 1035 aaPredicted RBP6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 GRM5P41594 1212 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 RNF20Q5VTR2 975 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 SENP2Q9HC62 589 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 RPGRIP1LQ68CZ1 1315 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 NPHP3Q7Z494 1330 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 TIMP2P16035 220 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 ATP2B4P23634 1241 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 SEPT12Q8IYM1 358 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 KIFC2Q96AC6 838 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 TRIM47Q96LD4 638 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 PCDHGA11Q9Y5H2 935 aa6.96□□□□□ -1.3
CDC42EP3-202ENST00000422687 CDC42BPGQ6DT37 1551 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 TECPR2O15040 1411 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 NR3C2P08235 984 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 GTF2IP78347 998 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 OCLNQ16625 522 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 NBPF20Q3BBV1 942 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 TREML4Q6UXN2 200 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 SLC10A4Q96EP9 437 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 SLIT2O94813 1529 aa6.95□□□□□ -1.3
CDC42EP3-202ENST00000422687 BLMP54132 1417 aaPredicted RBP6.94□□□□□ -1.3
CDC42EP3-202ENST00000422687 C11orf95C9JLR9 678 aaPredicted RBP6.94□□□□□ -1.3
CDC42EP3-202ENST00000422687 SEC13P55735 322 aa6.94□□□□□ -1.3
CDC42EP3-202ENST00000422687 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
CDC42EP3-202ENST00000422687 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
CDC42EP3-202ENST00000422687 NAIPQ13075 1403 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 RALGAPBQ86X10 1494 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 SOWAHDA6NJG2 315 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 FOXO3O43524 673 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 FSHRP23945 695 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 ARID5BQ14865 1188 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 VASH1Q7L8A9 365 aaPredicted RBP6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 TAS1R3Q7RTX0 852 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 UNC5CLQ8IV45 518 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 SIRT1Q96EB6 747 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 CXXC1Q9P0U4 656 aaPredicted RBP6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 GLI3P10071 1580 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 SPATA31A3Q5VYP0 1347 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 LRPPRCP42704 1394 aaKnown RBP6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.93□□□□□ -1.3
CDC42EP3-202ENST00000422687 BMP1P13497 986 aa6.92□□□□□ -1.3
CDC42EP3-202ENST00000422687 ESCO1Q5FWF5 840 aa6.92□□□□□ -1.3
CDC42EP3-202ENST00000422687 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
CDC42EP3-202ENST00000422687 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
CDC42EP3-202ENST00000422687 MARF1Q9Y4F3 1742 aaKnown RBP6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 M0R2N6 131 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 ITGAEP38570 1179 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 SERPINB4P48594 390 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 USP4Q13107 963 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 ITPKCQ96DU7 683 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 RRBP1Q9P2E9 1410 aaKnown RBP6.91□□□□□ -1.3
CDC42EP3-202ENST00000422687 KIF1BO60333 1816 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 ZIC2O95409 532 aaPredicted RBP6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 VPS72Q15906 364 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 MRPL14Q6P1L8 145 aaKnown RBP6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 DEFB132Q7Z7B7 95 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 EGFL7Q9UHF1 273 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 EMILIN1Q9Y6C2 1016 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 ADGRF5Q8IZF2 1346 aa6.9□□□□□ -1.3
CDC42EP3-202ENST00000422687 CCDC144AA2RUR9 1427 aa6.9□□□□□ -1.31
CDC42EP3-202ENST00000422687 SPATA31E1Q6ZUB1 1445 aa6.9□□□□□ -1.31
CDC42EP3-202ENST00000422687 LRP5O75197 1615 aa6.9□□□□□ -1.31
CDC42EP3-202ENST00000422687 PPLO60437 1756 aa6.9□□□□□ -1.31
CDC42EP3-202ENST00000422687 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 SFI1A8K8P3 1242 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 ERCC3P19447 782 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 SCNN1AP37088 669 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 NOM1Q5C9Z4 860 aaKnown RBP6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 KCTD15Q96SI1 283 aaPredicted RBP6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 SBNO1A3KN83 1393 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 ANKRD30BQ9BXX2 1392 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 PLEKHH1Q9ULM0 1364 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 USP32Q8NFA0 1604 aa6.89□□□□□ -1.31
CDC42EP3-202ENST00000422687 PIK3C2GO75747 1445 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 TNS3Q68CZ2 1445 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 PRMT3O60678 531 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 WEE1P30291 646 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 INTS6LQ5JSJ4 861 aaKnown RBP6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 KRT28Q7Z3Y7 464 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms