RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 PDE8AO60658 829 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
PDGFC-202ENST00000422544 RLBP1P12271 317 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
PDGFC-202ENST00000422544 MASTLQ96GX5 879 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 USP44Q9H0E7 712 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
PDGFC-202ENST00000422544 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
PDGFC-202ENST00000422544 NPR1P16066 1061 aa11.69□□□□□ -0.54
PDGFC-202ENST00000422544 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
PDGFC-202ENST00000422544 DALRD3Q5D0E6 543 aaKnown RBP11.69□□□□□ -0.54
PDGFC-202ENST00000422544 STYK1Q6J9G0 422 aa11.69□□□□□ -0.54
PDGFC-202ENST00000422544 PANK1Q8TE04 598 aa11.69□□□□□ -0.54
PDGFC-202ENST00000422544 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
PDGFC-202ENST00000422544 CCDC85AQ96PX6 553 aaPredicted RBP11.69□□□□□ -0.54
PDGFC-202ENST00000422544 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
PDGFC-202ENST00000422544 UTYO14607 1347 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
PDGFC-202ENST00000422544 CTSWP56202 376 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 TTLL6Q8N841 843 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
PDGFC-202ENST00000422544 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
PDGFC-202ENST00000422544 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 BCS1LQ9Y276 419 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
PDGFC-202ENST00000422544 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 MS4A1P11836 297 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 FOXO4P98177 505 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 C1QBPQ07021 282 aaKnown RBP11.67□□□□□ -0.54
PDGFC-202ENST00000422544 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
PDGFC-202ENST00000422544 ITPRIPQ8IWB1 547 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 KAZALD1Q96I82 304 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 MEIS3Q99687 375 aa11.67□□□□□ -0.54
PDGFC-202ENST00000422544 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
PDGFC-202ENST00000422544 CSF1RP07333 972 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 UBTFL1P0CB47 393 aaPredicted RBP11.66□□□□□ -0.54
PDGFC-202ENST00000422544 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
PDGFC-202ENST00000422544 PRPF40BQ6NWY9 871 aaKnown RBP11.66□□□□□ -0.54
PDGFC-202ENST00000422544 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
PDGFC-202ENST00000422544 ZBTB22O15209 634 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 APLP1P51693 650 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 LMBR1LQ6UX01 489 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
PDGFC-202ENST00000422544 BICC1Q9H694 974 aaKnown RBP11.65□□□□□ -0.54
PDGFC-202ENST00000422544 GREM2Q9H772 168 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 ANKRD31Q8N7Z5 1873 aa11.65□□□□□ -0.54
PDGFC-202ENST00000422544 ZBTB7BO15156 539 aaPredicted RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 C21orf2O43822 256 aa11.64□□□□□ -0.55
PDGFC-202ENST00000422544 BBOX1O75936 387 aa11.64□□□□□ -0.55
PDGFC-202ENST00000422544 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 GNAI3P08754 354 aa11.64□□□□□ -0.55
PDGFC-202ENST00000422544 GRAPQ13588 217 aa11.64□□□□□ -0.55
PDGFC-202ENST00000422544 MVPQ14764 893 aaKnown RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
PDGFC-202ENST00000422544 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 TNRC6CQ9HCJ0 1690 aaKnown RBP11.64□□□□□ -0.55
PDGFC-202ENST00000422544 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
PDGFC-202ENST00000422544 ITGA6P23229 1130 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
PDGFC-202ENST00000422544 OLFM4Q6UX06 510 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 ANKRD44Q8N8A2 993 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
PDGFC-202ENST00000422544 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
PDGFC-202ENST00000422544 TOMM70O94826 608 aa11.62□□□□□ -0.55
PDGFC-202ENST00000422544 GNAI2P04899 355 aa11.62□□□□□ -0.55
PDGFC-202ENST00000422544 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
PDGFC-202ENST00000422544 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
PDGFC-202ENST00000422544 ARHGAP27Q6ZUM4 889 aa11.62□□□□□ -0.55
PDGFC-202ENST00000422544 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
PDGFC-202ENST00000422544 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
PDGFC-202ENST00000422544 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
PDGFC-202ENST00000422544 CCDC57Q2TAC2 916 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 DDX19BQ9UMR2 479 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
PDGFC-202ENST00000422544 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
PDGFC-202ENST00000422544 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
PDGFC-202ENST00000422544 IGHMBP2P38935 993 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms