RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 NUBP1P53384 320 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 GNAI1P63096 354 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 WWC1Q8IX03 1113 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 SYNE4Q8N205 404 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 PLBD2Q8NHP8 589 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 TSR2Q969E8 191 aaKnown RBP10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 TRMT112Q9UI30 125 aaKnown RBP10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 TAF1P21675 1872 aa10.61□□□□□ -0.71
TRIM43CP-201ENST00000422468 SH3TC1Q8TE82 1336 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 ZNF541Q9H0D2 1346 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 PCNTO95613 3336 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 IQCA1LA6NCM1 817 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 FZD9O00144 591 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 FAM9BQ8IZU0 186 aa10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
TRIM43CP-201ENST00000422468 ABCC4O15439 1325 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 HCLS1P14317 486 aaPredicted RBP10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 HTRA3P83110 453 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 JDP2Q8WYK2 163 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 ISCA1Q9BUE6 129 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 COL4A5P29400 1685 aa10.59□□□□□ -0.71
TRIM43CP-201ENST00000422468 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 BBOX1O75936 387 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 TRIM28Q13263 835 aaKnown RBP10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 GPC2Q8N158 579 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 KLRG1Q96E93 195 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 CHMP4AQ9BY43 222 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
TRIM43CP-201ENST00000422468 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 VPS33BQ9H267 617 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 FANCIQ9NVI1 1328 aa10.57□□□□□ -0.72
TRIM43CP-201ENST00000422468 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 GRAPQ13588 217 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 G2E3Q7L622 706 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 TMC4Q7Z404 712 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 LDHDQ86WU2 507 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 SUPT20HQ8NEM7 779 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 GRAPLQ8TC17 118 aaPredicted RBP10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 RTFDC1Q9BY42 306 aaPredicted RBP10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
TRIM43CP-201ENST00000422468 PPIP5K2O43314 1243 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 EPHX2P34913 555 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 AOC3Q16853 763 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 DPP8Q6V1X1 898 aaPredicted RBP10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 PNMA8AQ86V59 439 aaPredicted RBP10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 NIM1KQ8IY84 436 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 MPNDQ8N594 471 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 JMYQ8N9B5 988 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 IL16Q14005 1332 aa10.55□□□□□ -0.72
TRIM43CP-201ENST00000422468 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 DDX58O95786 925 aaKnown RBP10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 LTBP1Q14766 1721 aa10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 ZBTB38Q8NAP3 1195 aaPredicted RBP10.54□□□□□ -0.72
TRIM43CP-201ENST00000422468 DUOX1Q9NRD9 1551 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 MYH3P11055 1940 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 CCDC191Q8NCU4 936 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 MYD88Q99836 296 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 ZNRF3Q9ULT6 936 aa10.53□□□□□ -0.72
TRIM43CP-201ENST00000422468 PASKQ96RG2 1323 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms