RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 DNAAF4Q8WXU2 420 aa17.79■□□□□ 0.44
CNBP-201ENST00000422453 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
CNBP-201ENST00000422453 PDE8AO60658 829 aa17.78■□□□□ 0.44
CNBP-201ENST00000422453 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
CNBP-201ENST00000422453 DPP8Q6V1X1 898 aaPredicted RBP17.78■□□□□ 0.44
CNBP-201ENST00000422453 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
CNBP-201ENST00000422453 LAMB2P55268 1798 aa17.78■□□□□ 0.44
CNBP-201ENST00000422453 CACNA1FO60840 1977 aa17.78■□□□□ 0.44
CNBP-201ENST00000422453 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
CNBP-201ENST00000422453 CCDC152Q4G0S7 254 aa17.77■□□□□ 0.44
CNBP-201ENST00000422453 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.43
CNBP-201ENST00000422453 LARGE2Q8N3Y3 721 aa17.77■□□□□ 0.43
CNBP-201ENST00000422453 MPNDQ8N594 471 aa17.77■□□□□ 0.43
CNBP-201ENST00000422453 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
CNBP-201ENST00000422453 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
CNBP-201ENST00000422453 MIER1Q8N108 512 aa17.76■□□□□ 0.43
CNBP-201ENST00000422453 CELF1Q92879 486 aaKnown RBP17.76■□□□□ 0.43
CNBP-201ENST00000422453 CDHR2Q9BYE9 1310 aa17.76■□□□□ 0.43
CNBP-201ENST00000422453 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 RBM46Q8TBY0 533 aaKnown RBP17.75■□□□□ 0.43
CNBP-201ENST00000422453 VPS33BQ9H267 617 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
CNBP-201ENST00000422453 EIF6P56537 245 aaKnown RBP17.74■□□□□ 0.43
CNBP-201ENST00000422453 RPS8P62241 208 aaKnown RBP17.74■□□□□ 0.43
CNBP-201ENST00000422453 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
CNBP-201ENST00000422453 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
CNBP-201ENST00000422453 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
CNBP-201ENST00000422453 GCKRQ14397 625 aa17.74■□□□□ 0.43
CNBP-201ENST00000422453 F6X3S4 739 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 FZD9O00144 591 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 CTSWP56202 376 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 AOC3Q16853 763 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 RTFDC1Q9BY42 306 aaPredicted RBP17.73■□□□□ 0.43
CNBP-201ENST00000422453 SEC31BQ9NQW1 1179 aa17.73■□□□□ 0.43
CNBP-201ENST00000422453 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
CNBP-201ENST00000422453 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
CNBP-201ENST00000422453 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
CNBP-201ENST00000422453 H7C1W4 665 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 HSPA6P17066 643 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 FSTL1Q12841 308 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 SMC1BQ8NDV3 1235 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 TAF1P21675 1872 aa17.71■□□□□ 0.43
CNBP-201ENST00000422453 CDC5LQ99459 802 aaKnown RBP17.71■□□□□ 0.42
CNBP-201ENST00000422453 GJA3Q9Y6H8 435 aa17.71■□□□□ 0.42
CNBP-201ENST00000422453 WDR90Q96KV7 1748 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 POTECB2RU33 542 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 BEND3Q5T5X7 828 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 GPC2Q8N158 579 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
CNBP-201ENST00000422453 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
CNBP-201ENST00000422453 ANKIB1Q9P2G1 1089 aa17.69■□□□□ 0.42
CNBP-201ENST00000422453 GPSM2P81274 684 aa17.68■□□□□ 0.42
CNBP-201ENST00000422453 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
CNBP-201ENST00000422453 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
CNBP-201ENST00000422453 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
CNBP-201ENST00000422453 EYA3Q99504 573 aa17.68■□□□□ 0.42
CNBP-201ENST00000422453 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
CNBP-201ENST00000422453 SSH1Q8WYL5 1049 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 PLA2G12BQ9BX93 195 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 GREM2Q9H772 168 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 C9orf78Q9NZ63 289 aaPredicted RBP17.67■□□□□ 0.42
CNBP-201ENST00000422453 HACL1Q9UJ83 578 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
CNBP-201ENST00000422453 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
CNBP-201ENST00000422453 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 TRMT2AQ8IZ69 625 aaKnown RBP17.67■□□□□ 0.42
CNBP-201ENST00000422453 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 PTPRCP08575 1304 aa17.67■□□□□ 0.42
CNBP-201ENST00000422453 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
CNBP-201ENST00000422453 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
CNBP-201ENST00000422453 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
CNBP-201ENST00000422453 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
CNBP-201ENST00000422453 COL4A5P29400 1685 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 G3V3G9 751 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 RIMBP2O15034 1052 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 APLP1P51693 650 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 CASP7P55210 303 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 DCAF8Q5TAQ9 597 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
CNBP-201ENST00000422453 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
CNBP-201ENST00000422453 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 LRRC37AA6NMS7 1700 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
CNBP-201ENST00000422453 GRM8O00222 908 aa17.64■□□□□ 0.42
CNBP-201ENST00000422453 UFL1O94874 794 aa17.64■□□□□ 0.42
CNBP-201ENST00000422453 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.42
CNBP-201ENST00000422453 TNIP1Q15025 636 aa17.64■□□□□ 0.42
CNBP-201ENST00000422453 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.42
CNBP-201ENST00000422453 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.42
CNBP-201ENST00000422453 MPHOSPH8Q99549 860 aa17.64■□□□□ 0.42
CNBP-201ENST00000422453 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.42
CNBP-201ENST00000422453 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms