RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 COL23A1Q86Y22 540 aaPredicted RBP10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 RTF1Q92541 710 aaKnown RBP10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 MYBBP1AQ9BQG0 1328 aaKnown RBP10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 MAP3K5Q99683 1374 aa10.02□□□□□ -0.8
AC012560.1-202ENST00000421324 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.8
AC012560.1-202ENST00000421324 USP46P62068 366 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 PARP9Q8IXQ6 854 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 IL17REQ8NFR9 667 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 ARXQ96QS3 562 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 PRKD2Q9BZL6 878 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
AC012560.1-202ENST00000421324 PAPPAQ13219 1627 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 HOXA2O43364 376 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 SSFA2P28290 1259 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 RC3H1Q5TC82 1133 aaKnown RBP10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 HLA-CQ95604 372 aa10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 RTCBQ9Y3I0 505 aaKnown RBP10.01□□□□□ -0.81
AC012560.1-202ENST00000421324 HTATSF1O43719 755 aaKnown RBP10□□□□□ -0.81
AC012560.1-202ENST00000421324 SLC39A6Q13433 755 aa10□□□□□ -0.81
AC012560.1-202ENST00000421324 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
AC012560.1-202ENST00000421324 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
AC012560.1-202ENST00000421324 PRKRIP1Q9H875 184 aaPredicted RBP10□□□□□ -0.81
AC012560.1-202ENST00000421324 CASZ1Q86V15 1759 aa9.99□□□□□ -0.81
AC012560.1-202ENST00000421324 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
AC012560.1-202ENST00000421324 MAPK8IP3Q9UPT6 1336 aa9.99□□□□□ -0.81
AC012560.1-202ENST00000421324 BTBD11A6QL63 1104 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 RFC4P35249 363 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 PDE4DQ08499 809 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 WDR43Q15061 677 aaKnown RBP eCLIP9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 MSL1Q68DK7 614 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 ZNF790Q6PG37 636 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 SMIM5Q71RC9 77 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 MCM10Q7L590 875 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 DNAJC10Q8IXB1 793 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 PLEKHF1Q96S99 279 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 SYT17Q9BSW7 474 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 C5P01031 1676 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 CNTNAP4Q9C0A0 1308 aa9.98□□□□□ -0.81
AC012560.1-202ENST00000421324 C4BP0C0L5 1744 aa9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 STARD3NLO95772 234 aa9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 AMIGO3Q86WK7 504 aa9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 SPIRE2Q8WWL2 714 aa9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
AC012560.1-202ENST00000421324 SCN11AQ9UI33 1791 aa9.96□□□□□ -0.81
AC012560.1-202ENST00000421324 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 MS4A1P11836 297 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 DCTN1Q14203 1278 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 NFE2L2Q16236 605 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 Q3C1V9 767 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 NUTM1Q86Y26 1132 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 FMNL2Q96PY5 1086 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 IRX2Q9BZI1 471 aaPredicted RBP9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 CCDC87Q9NVE4 849 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 CEMIPQ8WUJ3 1361 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.82
AC012560.1-202ENST00000421324 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 PNISRQ8TF01 805 aaKnown RBP9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 ZNF496Q96IT1 587 aaPredicted RBP9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 MRC1P22897 1456 aa9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
AC012560.1-202ENST00000421324 RIPK4P57078 832 aa9.94□□□□□ -0.82
AC012560.1-202ENST00000421324 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
AC012560.1-202ENST00000421324 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
AC012560.1-202ENST00000421324 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
AC012560.1-202ENST00000421324 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 ANP32CO43423 234 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 KCNQ3O43525 872 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 CANXP27824 592 aaKnown RBP9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 SLC19A1P41440 591 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 RUNDC1Q96C34 613 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
AC012560.1-202ENST00000421324 A0A087WZG4 1122 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 MMP10P09238 476 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 SNRPA1P09661 255 aaKnown RBP9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 GYS1P13807 737 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 TMPOP42166 694 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms