RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 LMBR1LQ6UX01 489 aa22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 C16orf71Q8IYS4 520 aaPredicted RBP22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 TRMT112Q9UI30 125 aaKnown RBP22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 NIP7Q9Y221 180 aaKnown RBP eCLIP22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 TNS1Q9HBL0 1735 aaKnown RBP22.12■■□□□ 1.13
PPFIA3-202ENST00000421230 RABL6Q3YEC7 729 aaPredicted RBP22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 TBC1D9Q6ZT07 1266 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 KLHDC4Q8TBB5 520 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 PPP1R9BQ96SB3 815 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 BCL2L12Q9HB09 334 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 CHMP3Q9Y3E7 222 aa22.11■■□□□ 1.13
PPFIA3-202ENST00000421230 ZPR1O75312 459 aa22.1■■□□□ 1.13
PPFIA3-202ENST00000421230 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
PPFIA3-202ENST00000421230 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
PPFIA3-202ENST00000421230 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
PPFIA3-202ENST00000421230 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
PPFIA3-202ENST00000421230 UBR3Q6ZT12 1888 aa22.09■■□□□ 1.13
PPFIA3-202ENST00000421230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 RFC4P35249 363 aa22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 CCDC173Q0VFZ6 552 aa22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 OTUD7AQ8TE49 926 aaPredicted RBP22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 SIL1Q9H173 461 aa22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 C4AP0C0L4 1744 aa22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.13
PPFIA3-202ENST00000421230 SSFA2P28290 1259 aa22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 OS9Q13438 667 aaPredicted RBP22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 CCDC85AQ96PX6 553 aaPredicted RBP22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 IL1RAPL2Q9NP60 686 aa22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 IRS4O14654 1257 aaPredicted RBP22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 RFX5P48382 616 aaPredicted RBP22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 KLHL40Q2TBA0 621 aa22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 PARP10Q53GL7 1025 aa22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 UTP14AQ9BVJ6 771 aaKnown RBP22.07■■□□□ 1.12
PPFIA3-202ENST00000421230 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 TPM2P07951 284 aa22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 FOXD4L1Q9NU39 408 aa22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 RHPN1Q8TCX5 695 aa22.06■■□□□ 1.12
PPFIA3-202ENST00000421230 GOLGA6L22H0YM25 854 aa22.05■■□□□ 1.12
PPFIA3-202ENST00000421230 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
PPFIA3-202ENST00000421230 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
PPFIA3-202ENST00000421230 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
PPFIA3-202ENST00000421230 PLA2G12BQ9BX93 195 aa22.05■■□□□ 1.12
PPFIA3-202ENST00000421230 NTSR2O95665 410 aa22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 BAG4O95429 457 aaKnown RBP22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 HCLS1P14317 486 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 EN1Q05925 392 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 HSP90AB4PQ58FF6 505 aa22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
PPFIA3-202ENST00000421230 ADRA2BP18089 450 aa22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 NASPP49321 788 aaPredicted RBP22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 G3BP1Q13283 466 aaKnown RBP eCLIP22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 KIF1BPQ96EK5 621 aa22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 CDC45O75419 566 aa22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 COPRSQ9NQ92 184 aa22.03■■□□□ 1.12
PPFIA3-202ENST00000421230 ZNF594Q96JF6 807 aaPredicted RBP22.02■■□□□ 1.12
PPFIA3-202ENST00000421230 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
PPFIA3-202ENST00000421230 RGL2O15211 777 aa22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 CSF1RP07333 972 aa22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 EZH2Q15910 746 aaKnown RBP22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 PKNOX2Q96KN3 472 aa22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 SETDB2Q96T68 719 aa22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.02■■□□□ 1.11
PPFIA3-202ENST00000421230 PDE8AO60658 829 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 SASH1O94885 1247 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 CTSWP56202 376 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 ZSCAN30Q86W11 494 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 TTLL11Q8NHH1 800 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 MYH3P11055 1940 aa22.01■■□□□ 1.11
PPFIA3-202ENST00000421230 ZNF445P59923 1031 aa22■■□□□ 1.11
PPFIA3-202ENST00000421230 GREM2Q9H772 168 aa22■■□□□ 1.11
PPFIA3-202ENST00000421230 DDX49Q9Y6V7 483 aaKnown RBP22■■□□□ 1.11
PPFIA3-202ENST00000421230 CCDC57Q2TAC2 916 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 ERFEQ4G0M1 354 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 RABEP1Q15276 862 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 TSHZ3Q63HK5 1081 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 ERC1Q8IUD2 1116 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
PPFIA3-202ENST00000421230 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 GYS1P13807 737 aa21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 CYP2E1P05181 493 aaPredicted RBP21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 GSPT1P15170 499 aaKnown RBP21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
PPFIA3-202ENST00000421230 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
PPFIA3-202ENST00000421230 IFIT5Q13325 482 aaKnown RBP21.97■■□□□ 1.11
PPFIA3-202ENST00000421230 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
PPFIA3-202ENST00000421230 CCDC24Q8N4L8 307 aa21.97■■□□□ 1.11
PPFIA3-202ENST00000421230 OFD1O75665 1012 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 ITGA6P23229 1130 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 NFIXQ14938 502 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 LRRC24Q50LG9 513 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms