RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NCOA7Q8NI08 942 aa14.12□□□□□ -0.15
CLCN4-203ENST00000421085 RMND1Q9NWS8 449 aa14.12□□□□□ -0.15
CLCN4-203ENST00000421085 EMILIN1Q9Y6C2 1016 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 TNIP1Q15025 636 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 LZTFL1Q9NQ48 299 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 FAM69CQ0P6D2 419 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 PRC1O43663 620 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 PDE1AP54750 535 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 CCDC114Q96M63 670 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 CETN1Q12798 172 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
CLCN4-203ENST00000421085 TACC1O75410 805 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 SEC24BO95487 1268 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 MARCKSP29966 332 aaPredicted RBP14.1□□□□□ -0.15
CLCN4-203ENST00000421085 IFIT5Q13325 482 aaKnown RBP14.1□□□□□ -0.15
CLCN4-203ENST00000421085 CAVIN4Q5BKX8 364 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
CLCN4-203ENST00000421085 EXOC1Q9NV70 894 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 RTL1A6NKG5 1358 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 ZNF569Q5MCW4 686 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 CCDC129Q6ZRS4 1044 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 KLF18A0A0U1RQI7 1052 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 A0A1B0GUL7 405 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 IFNKQ9P0W0 207 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 SLC52A1Q9NWF4 448 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 HDXQ7Z353 690 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 SELENOSQ9BQE4 189 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 SELENOOQ9BVL4 669 aa14.1□□□□□ -0.15
CLCN4-203ENST00000421085 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 RBM8AQ9Y5S9 174 aaKnown RBP14.09□□□□□ -0.15
CLCN4-203ENST00000421085 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
CLCN4-203ENST00000421085 MAP3K2Q9Y2U5 619 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 CCDC61Q9Y6R9 512 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 MXRA7P84157 204 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 NME9Q86XW9 330 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 USHBP1Q8N6Y0 703 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 TUBB4BP68371 445 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 FAM76AQ8TAV0 307 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 ERO1AQ96HE7 468 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 ALG1Q9BT22 464 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 GUCA1BQ9UMX6 200 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 IKBKGQ9Y6K9 419 aa14.09□□□□□ -0.15
CLCN4-203ENST00000421085 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.15
CLCN4-203ENST00000421085 Q6ZUG5 572 aa14.08□□□□□ -0.15
CLCN4-203ENST00000421085 PPP1R14CQ8TAE6 165 aa14.08□□□□□ -0.15
CLCN4-203ENST00000421085 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.15
CLCN4-203ENST00000421085 CPLX4Q7Z7G2 160 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 SPAG1Q07617 926 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 PROSER2Q86WR7 435 aaPredicted RBP14.08□□□□□ -0.16
CLCN4-203ENST00000421085 ANKRD18BA2A2Z9 1011 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 KRT86O43790 486 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 KRT83P78385 493 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
CLCN4-203ENST00000421085 EVCP57679 992 aa14.08□□□□□ -0.16
CLCN4-203ENST00000421085 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.16
CLCN4-203ENST00000421085 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
CLCN4-203ENST00000421085 STARD3NLO95772 234 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 SLC5A1P13866 664 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 MEIS3Q99687 375 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 FAM83GA6ND36 823 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 KIF5AQ12840 1032 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 CCDC97Q96F63 343 aaPredicted RBP14.07□□□□□ -0.16
CLCN4-203ENST00000421085 IL16Q14005 1332 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 DZIP1Q86YF9 867 aaKnown RBP14.07□□□□□ -0.16
CLCN4-203ENST00000421085 RASAL2Q9UJF2 1139 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 IFT81Q8WYA0 676 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 RSRC1Q96IZ7 334 aaKnown RBP14.07□□□□□ -0.16
CLCN4-203ENST00000421085 STAT6P42226 847 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 PPP2R3AQ06190 1150 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 NAA25Q14CX7 972 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 SPAG5Q96R06 1193 aa14.07□□□□□ -0.16
CLCN4-203ENST00000421085 STMN4Q9H169 189 aaPredicted RBP14.07□□□□□ -0.16
CLCN4-203ENST00000421085 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 MPRIPQ6WCQ1 1025 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 MYRIPQ8NFW9 859 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 KIF5BP33176 963 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 AK2P54819 239 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 SPTLC2O15270 562 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
CLCN4-203ENST00000421085 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
CLCN4-203ENST00000421085 KRT13P13646 458 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 DDX12PQ92771 950 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 VAT1LQ9HCJ6 419 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 CEP83Q9Y592 693 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 TTF1Q15361 905 aaPredicted RBP14.05□□□□□ -0.16
CLCN4-203ENST00000421085 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
CLCN4-203ENST00000421085 CUL5Q93034 780 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms