RNA–Protein interactions for RNA: ENST00000420291.1

BRPF1-202, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 860 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-202ENST00000420291 VPS33BQ9H267 617 aa28.71■■■□□ 2.19
BRPF1-202ENST00000420291 PDE8AO60658 829 aa28.7■■■□□ 2.18
BRPF1-202ENST00000420291 CWF19L2Q2TBE0 894 aaKnown RBP28.7■■■□□ 2.18
BRPF1-202ENST00000420291 LINS1Q8NG48 757 aa28.7■■■□□ 2.18
BRPF1-202ENST00000420291 RRAGCQ9HB90 399 aa28.7■■■□□ 2.18
BRPF1-202ENST00000420291 DDX60Q8IY21 1712 aaKnown RBP28.69■■■□□ 2.18
BRPF1-202ENST00000420291 H7C1W4 665 aa28.69■■■□□ 2.18
BRPF1-202ENST00000420291 SLC51AQ86UW1 340 aa28.69■■■□□ 2.18
BRPF1-202ENST00000420291 CACNA1FO60840 1977 aa28.69■■■□□ 2.18
BRPF1-202ENST00000420291 DICER1Q9UPY3 1922 aaKnown RBP28.68■■■□□ 2.18
BRPF1-202ENST00000420291 CCDC88AQ3V6T2 1871 aa28.68■■■□□ 2.18
BRPF1-202ENST00000420291 LAMB2P55268 1798 aa28.67■■■□□ 2.18
BRPF1-202ENST00000420291 FZD9O00144 591 aa28.67■■■□□ 2.18
BRPF1-202ENST00000420291 VEGFAP15692 232 aaPredicted RBP28.67■■■□□ 2.18
BRPF1-202ENST00000420291 GCKRQ14397 625 aa28.67■■■□□ 2.18
BRPF1-202ENST00000420291 CDCA7LQ96GN5 454 aa28.67■■■□□ 2.18
BRPF1-202ENST00000420291 POTECB2RU33 542 aa28.66■■■□□ 2.18
BRPF1-202ENST00000420291 JARID2Q92833 1246 aaPredicted RBP28.66■■■□□ 2.18
BRPF1-202ENST00000420291 CELF1Q92879 486 aaKnown RBP28.66■■■□□ 2.18
BRPF1-202ENST00000420291 RPS8P62241 208 aaKnown RBP28.65■■■□□ 2.18
BRPF1-202ENST00000420291 CCDC152Q4G0S7 254 aa28.65■■■□□ 2.18
BRPF1-202ENST00000420291 TIAM2Q8IVF5 1701 aa28.64■■■□□ 2.18
BRPF1-202ENST00000420291 MPNDQ8N594 471 aa28.64■■■□□ 2.18
BRPF1-202ENST00000420291 SUPT20HQ8NEM7 779 aa28.64■■■□□ 2.18
BRPF1-202ENST00000420291 RBM46Q8TBY0 533 aaKnown RBP28.64■■■□□ 2.18
BRPF1-202ENST00000420291 JDP2Q8WYK2 163 aa28.64■■■□□ 2.18
BRPF1-202ENST00000420291 CASP7P55210 303 aa28.63■■■□□ 2.17
BRPF1-202ENST00000420291 BEND3Q5T5X7 828 aa28.63■■■□□ 2.17
BRPF1-202ENST00000420291 PLA2G12BQ9BX93 195 aa28.63■■■□□ 2.17
BRPF1-202ENST00000420291 DDNO94850 711 aaPredicted RBP28.62■■■□□ 2.17
BRPF1-202ENST00000420291 DPP8Q6V1X1 898 aaPredicted RBP28.62■■■□□ 2.17
BRPF1-202ENST00000420291 TTLL11Q8NHH1 800 aa28.62■■■□□ 2.17
BRPF1-202ENST00000420291 L3MBTL3Q96JM7 780 aaPredicted RBP28.62■■■□□ 2.17
BRPF1-202ENST00000420291 F6X3S4 739 aa28.61■■■□□ 2.17
BRPF1-202ENST00000420291 CTSWP56202 376 aa28.61■■■□□ 2.17
BRPF1-202ENST00000420291 MRPL50Q8N5N7 158 aaKnown RBP28.61■■■□□ 2.17
BRPF1-202ENST00000420291 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
BRPF1-202ENST00000420291 CT47B1P0C2W7 299 aaPredicted RBP28.6■■■□□ 2.17
BRPF1-202ENST00000420291 UBE3BQ7Z3V4 1068 aa28.6■■■□□ 2.17
BRPF1-202ENST00000420291 C16orf71Q8IYS4 520 aaPredicted RBP28.6■■■□□ 2.17
BRPF1-202ENST00000420291 LARGE2Q8N3Y3 721 aa28.6■■■□□ 2.17
BRPF1-202ENST00000420291 WDR90Q96KV7 1748 aa28.59■■■□□ 2.17
BRPF1-202ENST00000420291 RTL9Q8NET4 1388 aa28.59■■■□□ 2.17
BRPF1-202ENST00000420291 KIAA2012Q0VF49 1180 aa28.58■■■□□ 2.17
BRPF1-202ENST00000420291 ALDH1L2Q3SY69 923 aa28.58■■■□□ 2.17
BRPF1-202ENST00000420291 SSH1Q8WYL5 1049 aa28.58■■■□□ 2.17
BRPF1-202ENST00000420291 ZNF541Q9H0D2 1346 aa28.58■■■□□ 2.17
BRPF1-202ENST00000420291 PPIP5K2O43314 1243 aa28.57■■■□□ 2.16
BRPF1-202ENST00000420291 FSTL1Q12841 308 aa28.57■■■□□ 2.16
BRPF1-202ENST00000420291 GPC2Q8N158 579 aa28.57■■■□□ 2.16
BRPF1-202ENST00000420291 COL4A5P29400 1685 aa28.57■■■□□ 2.16
BRPF1-202ENST00000420291 CSF1RP07333 972 aa28.56■■■□□ 2.16
BRPF1-202ENST00000420291 AOC3Q16853 763 aa28.56■■■□□ 2.16
BRPF1-202ENST00000420291 PODXL2Q9NZ53 605 aa28.56■■■□□ 2.16
BRPF1-202ENST00000420291 PTPRCP08575 1304 aa28.55■■■□□ 2.16
BRPF1-202ENST00000420291 ALDH1L1O75891 902 aa28.55■■■□□ 2.16
BRPF1-202ENST00000420291 NSFL1CQ9UNZ2 370 aaKnown RBP28.55■■■□□ 2.16
BRPF1-202ENST00000420291 LRRC37AA6NMS7 1700 aa28.55■■■□□ 2.16
BRPF1-202ENST00000420291 COL4A1P02462 1669 aa28.54■■■□□ 2.16
BRPF1-202ENST00000420291 IQCA1LA6NCM1 817 aa28.54■■■□□ 2.16
BRPF1-202ENST00000420291 HSPA6P17066 643 aa28.54■■■□□ 2.16
BRPF1-202ENST00000420291 EIF6P56537 245 aaKnown RBP28.54■■■□□ 2.16
BRPF1-202ENST00000420291 NIM1KQ8IY84 436 aa28.54■■■□□ 2.16
BRPF1-202ENST00000420291 CDC5LQ99459 802 aaKnown RBP28.54■■■□□ 2.16
BRPF1-202ENST00000420291 TAF1P21675 1872 aa28.54■■■□□ 2.16
BRPF1-202ENST00000420291 GPSM2P81274 684 aa28.53■■■□□ 2.16
BRPF1-202ENST00000420291 ANKRD18AQ8IVF6 992 aa28.53■■■□□ 2.16
BRPF1-202ENST00000420291 CCDC85AQ96PX6 553 aaPredicted RBP28.53■■■□□ 2.16
BRPF1-202ENST00000420291 GREM2Q9H772 168 aa28.53■■■□□ 2.16
BRPF1-202ENST00000420291 POLLQ9UGP5 575 aa28.53■■■□□ 2.16
BRPF1-202ENST00000420291 ZNRF3Q9ULT6 936 aa28.53■■■□□ 2.16
BRPF1-202ENST00000420291 SMC1BQ8NDV3 1235 aa28.52■■■□□ 2.16
BRPF1-202ENST00000420291 GRM8O00222 908 aa28.51■■■□□ 2.15
BRPF1-202ENST00000420291 BRPF1P55201 1214 aaPredicted RBP28.51■■■□□ 2.15
BRPF1-202ENST00000420291 SRCIN1Q9C0H9 1055 aa28.51■■■□□ 2.15
BRPF1-202ENST00000420291 BSDC1Q9NW68 430 aaPredicted RBP28.51■■■□□ 2.15
BRPF1-202ENST00000420291 DUOX1Q9NRD9 1551 aa28.5■■■□□ 2.15
BRPF1-202ENST00000420291 TBC1D16Q8TBP0 767 aa28.5■■■□□ 2.15
BRPF1-202ENST00000420291 FOXO4P98177 505 aa28.49■■■□□ 2.15
BRPF1-202ENST00000420291 WASHC4Q2M389 1173 aa28.49■■■□□ 2.15
BRPF1-202ENST00000420291 SLC4A10Q6U841 1118 aa28.49■■■□□ 2.15
BRPF1-202ENST00000420291 TAF1DQ9H5J8 278 aaPredicted RBP28.49■■■□□ 2.15
BRPF1-202ENST00000420291 UTYO14607 1347 aa28.47■■■□□ 2.15
BRPF1-202ENST00000420291 CXCL9Q07325 125 aa28.47■■■□□ 2.15
BRPF1-202ENST00000420291 EYA3Q99504 573 aa28.47■■■□□ 2.15
BRPF1-202ENST00000420291 HACL1Q9UJ83 578 aa28.47■■■□□ 2.15
BRPF1-202ENST00000420291 C6orf229H3BNL8 230 aa28.46■■■□□ 2.15
BRPF1-202ENST00000420291 ITGA6P23229 1130 aa28.46■■■□□ 2.15
BRPF1-202ENST00000420291 C9orf78Q9NZ63 289 aaPredicted RBP28.46■■■□□ 2.15
BRPF1-202ENST00000420291 ANKIB1Q9P2G1 1089 aa28.46■■■□□ 2.15
BRPF1-202ENST00000420291 MINPP1Q9UNW1 487 aa28.46■■■□□ 2.15
BRPF1-202ENST00000420291 BCL2L13Q9BXK5 485 aa28.45■■■□□ 2.14
BRPF1-202ENST00000420291 SMC4Q9NTJ3 1288 aa28.45■■■□□ 2.14
BRPF1-202ENST00000420291 XDHP47989 1333 aa28.44■■■□□ 2.14
BRPF1-202ENST00000420291 LTBP1Q14766 1721 aa28.44■■■□□ 2.14
BRPF1-202ENST00000420291 FAM161AQ3B820 660 aa28.44■■■□□ 2.14
BRPF1-202ENST00000420291 GGA1Q9UJY5 639 aa28.44■■■□□ 2.14
BRPF1-202ENST00000420291 GJA3Q9Y6H8 435 aa28.44■■■□□ 2.14
BRPF1-202ENST00000420291 YDJCA8MPS7 323 aa28.43■■■□□ 2.14
BRPF1-202ENST00000420291 EPHX2P34913 555 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms