RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
NFE4-201ENST00000420058 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
NFE4-201ENST00000420058 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
NFE4-201ENST00000420058 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
NFE4-201ENST00000420058 MPNDQ8N594 471 aa18.77■□□□□ 0.6
NFE4-201ENST00000420058 SUPT20HQ8NEM7 779 aa18.76■□□□□ 0.59
NFE4-201ENST00000420058 TRPM4Q8TD43 1214 aa18.76■□□□□ 0.59
NFE4-201ENST00000420058 HHIPL1Q96JK4 782 aa18.76■□□□□ 0.59
NFE4-201ENST00000420058 ZIC5Q96T25 663 aa18.76■□□□□ 0.59
NFE4-201ENST00000420058 TCIRG1Q13488 830 aa18.75■□□□□ 0.59
NFE4-201ENST00000420058 DLK2Q6UY11 383 aa18.75■□□□□ 0.59
NFE4-201ENST00000420058 XAGE3Q8WTP9 111 aa18.75■□□□□ 0.59
NFE4-201ENST00000420058 ZC3H15Q8WU90 426 aaKnown RBP18.75■□□□□ 0.59
NFE4-201ENST00000420058 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
NFE4-201ENST00000420058 RIPK4P57078 832 aa18.74■□□□□ 0.59
NFE4-201ENST00000420058 GRAPQ13588 217 aa18.74■□□□□ 0.59
NFE4-201ENST00000420058 GRAPLQ8TC17 118 aaPredicted RBP18.74■□□□□ 0.59
NFE4-201ENST00000420058 BEGAINQ9BUH8 593 aa18.74■□□□□ 0.59
NFE4-201ENST00000420058 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
NFE4-201ENST00000420058 CNOT7Q9UIV1 285 aaKnown RBP18.74■□□□□ 0.59
NFE4-201ENST00000420058 TNRC18O15417 2968 aaPredicted RBP18.74■□□□□ 0.59
NFE4-201ENST00000420058 AIMP1Q12904 312 aaKnown RBP18.73■□□□□ 0.59
NFE4-201ENST00000420058 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
NFE4-201ENST00000420058 NECTIN2Q92692 538 aa18.73■□□□□ 0.59
NFE4-201ENST00000420058 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
NFE4-201ENST00000420058 TAF1P21675 1872 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 SLC34A2O95436 690 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 TNIP1Q15025 636 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
NFE4-201ENST00000420058 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 ZNF428Q96B54 188 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
NFE4-201ENST00000420058 TRMT112Q9UI30 125 aaKnown RBP18.72■□□□□ 0.59
NFE4-201ENST00000420058 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
NFE4-201ENST00000420058 LAMB2P55268 1798 aa18.71■□□□□ 0.59
NFE4-201ENST00000420058 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
NFE4-201ENST00000420058 BRPF1P55201 1214 aaPredicted RBP18.71■□□□□ 0.59
NFE4-201ENST00000420058 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
NFE4-201ENST00000420058 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
NFE4-201ENST00000420058 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
NFE4-201ENST00000420058 DUOX1Q9NRD9 1551 aa18.71■□□□□ 0.59
NFE4-201ENST00000420058 SH3TC1Q8TE82 1336 aa18.71■□□□□ 0.59
NFE4-201ENST00000420058 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 CHL1O00533 1208 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 EGFRP00533 1210 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 KCNQ5Q9NR82 932 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
NFE4-201ENST00000420058 CA12O43570 354 aa18.69■□□□□ 0.58
NFE4-201ENST00000420058 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
NFE4-201ENST00000420058 MICALL2Q8IY33 904 aa18.69■□□□□ 0.58
NFE4-201ENST00000420058 DPF2Q92785 391 aa18.69■□□□□ 0.58
NFE4-201ENST00000420058 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
NFE4-201ENST00000420058 ZNF408Q9H9D4 720 aa18.69■□□□□ 0.58
NFE4-201ENST00000420058 PSMD14O00487 310 aa18.68■□□□□ 0.58
NFE4-201ENST00000420058 MLLT1Q03111 559 aaPredicted RBP18.68■□□□□ 0.58
NFE4-201ENST00000420058 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
NFE4-201ENST00000420058 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
NFE4-201ENST00000420058 POLLQ9UGP5 575 aa18.68■□□□□ 0.58
NFE4-201ENST00000420058 COL4A1P02462 1669 aa18.67■□□□□ 0.58
NFE4-201ENST00000420058 H7C1D1 291 aa18.67■□□□□ 0.58
NFE4-201ENST00000420058 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
NFE4-201ENST00000420058 FAM155AB1AL88 458 aaPredicted RBP18.66■□□□□ 0.58
NFE4-201ENST00000420058 WASHC4Q2M389 1173 aa18.66■□□□□ 0.58
NFE4-201ENST00000420058 FAM89AQ96GI7 184 aa18.66■□□□□ 0.58
NFE4-201ENST00000420058 DBNDD1Q9H9R9 158 aa18.66■□□□□ 0.58
NFE4-201ENST00000420058 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
NFE4-201ENST00000420058 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
NFE4-201ENST00000420058 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
NFE4-201ENST00000420058 HUNKP57058 714 aa18.65■□□□□ 0.58
NFE4-201ENST00000420058 GPSM2P81274 684 aa18.65■□□□□ 0.58
NFE4-201ENST00000420058 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
NFE4-201ENST00000420058 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
NFE4-201ENST00000420058 NSFL1CQ9UNZ2 370 aaKnown RBP18.65■□□□□ 0.58
NFE4-201ENST00000420058 RTL9Q8NET4 1388 aa18.65■□□□□ 0.58
NFE4-201ENST00000420058 LRRC37AA6NMS7 1700 aa18.64■□□□□ 0.57
NFE4-201ENST00000420058 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.57
NFE4-201ENST00000420058 RIMBP2O15034 1052 aa18.64■□□□□ 0.57
NFE4-201ENST00000420058 NOGQ13253 232 aa18.64■□□□□ 0.57
NFE4-201ENST00000420058 ANKRD13DQ6ZTN6 518 aa18.64■□□□□ 0.57
NFE4-201ENST00000420058 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
NFE4-201ENST00000420058 PDE4DIPQ5VU43 2346 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 DGKZQ13574 1117 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
NFE4-201ENST00000420058 DDX60Q8IY21 1712 aaKnown RBP18.62■□□□□ 0.57
NFE4-201ENST00000420058 ASTN2O75129 1339 aaPredicted RBP18.61■□□□□ 0.57
NFE4-201ENST00000420058 ADM5C9JUS6 153 aa18.61■□□□□ 0.57
NFE4-201ENST00000420058 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
NFE4-201ENST00000420058 ECE2O60344 883 aa18.61■□□□□ 0.57
NFE4-201ENST00000420058 VIL1P09327 827 aaKnown RBP18.61■□□□□ 0.57
NFE4-201ENST00000420058 RBM26Q5T8P6 1007 aaKnown RBP18.61■□□□□ 0.57
NFE4-201ENST00000420058 RGMBQ6NW40 437 aa18.61■□□□□ 0.57
NFE4-201ENST00000420058 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
NFE4-201ENST00000420058 GBA2Q9HCG7 927 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms