RNA–Protein interactions for RNA: ENST00000419940.5

TGFA-204, Transcript of transforming growth factor alpha, humanhuman

TSL 5

Gene TGFA, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-204ENST00000419940 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
TGFA-204ENST00000419940 CSF1RP07333 972 aa16.29■□□□□ 0.2
TGFA-204ENST00000419940 GNAI3P08754 354 aa16.29■□□□□ 0.2
TGFA-204ENST00000419940 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
TGFA-204ENST00000419940 CTSWP56202 376 aa16.29■□□□□ 0.2
TGFA-204ENST00000419940 STYK1Q6J9G0 422 aa16.29■□□□□ 0.2
TGFA-204ENST00000419940 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
TGFA-204ENST00000419940 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
TGFA-204ENST00000419940 LMBR1LQ6UX01 489 aa16.28■□□□□ 0.2
TGFA-204ENST00000419940 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
TGFA-204ENST00000419940 BICC1Q9H694 974 aaKnown RBP16.28■□□□□ 0.2
TGFA-204ENST00000419940 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
TGFA-204ENST00000419940 TAF1P21675 1872 aa16.28■□□□□ 0.2
TGFA-204ENST00000419940 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
TGFA-204ENST00000419940 TTLL6Q8N841 843 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 CNKSR1Q969H4 720 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 GREM2Q9H772 168 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
TGFA-204ENST00000419940 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.2
TGFA-204ENST00000419940 MYH3P11055 1940 aa16.27■□□□□ 0.19
TGFA-204ENST00000419940 ALDH1B1P30837 517 aa16.26■□□□□ 0.19
TGFA-204ENST00000419940 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
TGFA-204ENST00000419940 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
TGFA-204ENST00000419940 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
TGFA-204ENST00000419940 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 COL4A1P02462 1669 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
TGFA-204ENST00000419940 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 CACNA1SQ13698 1873 aa16.25■□□□□ 0.19
TGFA-204ENST00000419940 GNAI2P04899 355 aa16.24■□□□□ 0.19
TGFA-204ENST00000419940 ITGA6P23229 1130 aa16.24■□□□□ 0.19
TGFA-204ENST00000419940 GRAPQ13588 217 aa16.24■□□□□ 0.19
TGFA-204ENST00000419940 PRPF40BQ6NWY9 871 aaKnown RBP16.24■□□□□ 0.19
TGFA-204ENST00000419940 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
TGFA-204ENST00000419940 GRAPLQ8TC17 118 aaPredicted RBP16.24■□□□□ 0.19
TGFA-204ENST00000419940 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
TGFA-204ENST00000419940 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
TGFA-204ENST00000419940 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
TGFA-204ENST00000419940 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
TGFA-204ENST00000419940 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
TGFA-204ENST00000419940 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
TGFA-204ENST00000419940 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
TGFA-204ENST00000419940 C21orf2O43822 256 aa16.22■□□□□ 0.19
TGFA-204ENST00000419940 BBOX1O75936 387 aa16.22■□□□□ 0.19
TGFA-204ENST00000419940 IFIT5Q13325 482 aaKnown RBP16.22■□□□□ 0.19
TGFA-204ENST00000419940 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
TGFA-204ENST00000419940 ZNF594Q96JF6 807 aaPredicted RBP16.22■□□□□ 0.19
TGFA-204ENST00000419940 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
TGFA-204ENST00000419940 GPR162Q16538 588 aa16.21■□□□□ 0.19
TGFA-204ENST00000419940 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
TGFA-204ENST00000419940 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
TGFA-204ENST00000419940 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
TGFA-204ENST00000419940 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
TGFA-204ENST00000419940 ATP8B2P98198 1209 aa16.2■□□□□ 0.18
TGFA-204ENST00000419940 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
TGFA-204ENST00000419940 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
TGFA-204ENST00000419940 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
TGFA-204ENST00000419940 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
TGFA-204ENST00000419940 MTX1Q13505 466 aa16.19■□□□□ 0.18
TGFA-204ENST00000419940 SP8Q8IXZ3 490 aa16.19■□□□□ 0.18
TGFA-204ENST00000419940 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
TGFA-204ENST00000419940 ATP6V0A2Q9Y487 856 aa16.19■□□□□ 0.18
TGFA-204ENST00000419940 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
TGFA-204ENST00000419940 IGHMBP2P38935 993 aaKnown RBP16.18■□□□□ 0.18
TGFA-204ENST00000419940 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
TGFA-204ENST00000419940 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
TGFA-204ENST00000419940 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
TGFA-204ENST00000419940 PTPN12Q05209 780 aaKnown RBP16.17■□□□□ 0.18
TGFA-204ENST00000419940 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
TGFA-204ENST00000419940 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
TGFA-204ENST00000419940 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
TGFA-204ENST00000419940 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
TGFA-204ENST00000419940 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
TGFA-204ENST00000419940 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
TGFA-204ENST00000419940 TMC4Q7Z404 712 aa16.16■□□□□ 0.18
TGFA-204ENST00000419940 MINPP1Q9UNW1 487 aa16.16■□□□□ 0.18
TGFA-204ENST00000419940 PA2G4Q9UQ80 394 aaKnown RBP16.16■□□□□ 0.18
TGFA-204ENST00000419940 POLA2Q14181 598 aa16.15■□□□□ 0.18
TGFA-204ENST00000419940 LRRC24Q50LG9 513 aa16.15■□□□□ 0.18
TGFA-204ENST00000419940 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
TGFA-204ENST00000419940 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
TGFA-204ENST00000419940 SSH3Q8TE77 659 aa16.15■□□□□ 0.18
TGFA-204ENST00000419940 PCDHB15Q9Y5E8 787 aa16.15■□□□□ 0.18
TGFA-204ENST00000419940 GPSM2P81274 684 aa16.14■□□□□ 0.17
TGFA-204ENST00000419940 CCDC93Q567U6 631 aa16.14■□□□□ 0.17
TGFA-204ENST00000419940 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
TGFA-204ENST00000419940 SIL1Q9H173 461 aa16.14■□□□□ 0.17
TGFA-204ENST00000419940 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
TGFA-204ENST00000419940 CNNM1Q9NRU3 951 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms