RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TTC9Q92623 222 aa6.93□□□□□ -1.3
SDCBPP3-201ENST00000419629 IFT43Q96FT9 208 aa6.93□□□□□ -1.3
SDCBPP3-201ENST00000419629 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
SDCBPP3-201ENST00000419629 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
SDCBPP3-201ENST00000419629 CLUAP1Q96AJ1 413 aa6.92□□□□□ -1.3
SDCBPP3-201ENST00000419629 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 SASH3O75995 380 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 NOS3P29474 1203 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 IREB2P48200 963 aaKnown RBP6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 IGF2-ASQ6U949 168 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 KRT25Q7Z3Z0 450 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 WFDC8Q8IUA0 241 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 PPP1R12CQ9BZL4 782 aa6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 QTRT2Q9H974 415 aaKnown RBP6.91□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L12C9JPN9 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L21D6R901 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 OPLAHO14841 1288 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 MICAL2O94851 1124 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 WEE1P30291 646 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 ARSDP51689 593 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 GPLD1P80108 840 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 DGKZQ13574 1117 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
SDCBPP3-201ENST00000419629 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
SDCBPP3-201ENST00000419629 RARAP10276 462 aa6.89□□□□□ -1.31
SDCBPP3-201ENST00000419629 PROSER2Q86WR7 435 aaPredicted RBP6.89□□□□□ -1.31
SDCBPP3-201ENST00000419629 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
SDCBPP3-201ENST00000419629 ARXQ96QS3 562 aa6.89□□□□□ -1.31
SDCBPP3-201ENST00000419629 DLL1O00548 723 aa6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 NRLP54845 237 aa6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 MYO19Q96H55 970 aa6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
SDCBPP3-201ENST00000419629 FOXO3O43524 673 aa6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 HFE2Q6ZVN8 426 aa6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 VRTNQ9H8Y1 702 aa6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 TLR7Q9NYK1 1049 aaKnown RBP6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 RNF112Q9ULX5 631 aa6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 USP20Q9Y2K6 914 aa6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 RTCBQ9Y3I0 505 aaKnown RBP6.87□□□□□ -1.31
SDCBPP3-201ENST00000419629 EGFRP00533 1210 aa6.86□□□□□ -1.31
SDCBPP3-201ENST00000419629 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
SDCBPP3-201ENST00000419629 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
SDCBPP3-201ENST00000419629 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
SDCBPP3-201ENST00000419629 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
SDCBPP3-201ENST00000419629 ARID4AP29374 1257 aaPredicted RBP6.85□□□□□ -1.31
SDCBPP3-201ENST00000419629 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
SDCBPP3-201ENST00000419629 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 J3QW42 95 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 EIF2AK2P19525 551 aaKnown RBP6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 SIK1P57059 783 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 AKTIPQ9H8T0 292 aa6.84□□□□□ -1.31
SDCBPP3-201ENST00000419629 MMP20O60882 483 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 XYLBO75191 536 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 ALX3O95076 343 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 RGL4Q8IZJ4 473 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 VTI1AQ96AJ9 217 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 KCNMB2Q9Y691 235 aa6.83□□□□□ -1.32
SDCBPP3-201ENST00000419629 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 SETDB1Q15047 1291 aa6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 SLC51AQ86UW1 340 aa6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 TREML1Q86YW5 311 aa6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.82□□□□□ -1.32
SDCBPP3-201ENST00000419629 A6NJR5 290 aa6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 PSAPP07602 524 aa6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 COX20Q5RI15 118 aa6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 FAM200AQ8TCP9 573 aa6.81□□□□□ -1.32
SDCBPP3-201ENST00000419629 FSTP19883 344 aa6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 SOX18P35713 384 aa6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 CFAP70Q5T0N1 1121 aa6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 Q6ZS46 218 aa6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 SRA1Q9HD15 236 aaKnown RBP6.8□□□□□ -1.32
SDCBPP3-201ENST00000419629 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
SDCBPP3-201ENST00000419629 MAP4K3Q8IVH8 894 aa6.79□□□□□ -1.32
SDCBPP3-201ENST00000419629 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
SDCBPP3-201ENST00000419629 GHRHP01286 108 aa6.78□□□□□ -1.32
SDCBPP3-201ENST00000419629 TRIP4Q15650 581 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms