RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
ATG4B-208ENST00000419606 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
ATG4B-208ENST00000419606 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
ATG4B-208ENST00000419606 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
ATG4B-208ENST00000419606 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
ATG4B-208ENST00000419606 KIAA1551Q9HCM1 1747 aa16.03■□□□□ 0.16
ATG4B-208ENST00000419606 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
ATG4B-208ENST00000419606 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
ATG4B-208ENST00000419606 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-208ENST00000419606 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 CHRNA5P30532 468 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-208ENST00000419606 MTX1Q13505 466 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 ZNF594Q96JF6 807 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-208ENST00000419606 PA2G4Q9UQ80 394 aaKnown RBP16.02■□□□□ 0.16
ATG4B-208ENST00000419606 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 SPEF2Q9C093 1822 aa16.02■□□□□ 0.16
ATG4B-208ENST00000419606 IGHDP01880 384 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 ITGA6P23229 1130 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 AAMPQ13685 434 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 POLA2Q14181 598 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 RPAP2Q8IXW5 612 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-208ENST00000419606 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 PPP1R1BQ9UD71 204 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-208ENST00000419606 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
ATG4B-208ENST00000419606 CACNA1SQ13698 1873 aa16■□□□□ 0.15
ATG4B-208ENST00000419606 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
ATG4B-208ENST00000419606 PDE6BP35913 854 aa16■□□□□ 0.15
ATG4B-208ENST00000419606 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
ATG4B-208ENST00000419606 SSH3Q8TE77 659 aa16■□□□□ 0.15
ATG4B-208ENST00000419606 A0A0G2JLW4 131 aa15.99■□□□□ 0.15
ATG4B-208ENST00000419606 SRGNP10124 158 aa15.99■□□□□ 0.15
ATG4B-208ENST00000419606 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
ATG4B-208ENST00000419606 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
ATG4B-208ENST00000419606 DPEP1P16444 411 aa15.98■□□□□ 0.15
ATG4B-208ENST00000419606 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
ATG4B-208ENST00000419606 IFIT5Q13325 482 aaKnown RBP15.98■□□□□ 0.15
ATG4B-208ENST00000419606 CCDC57Q2TAC2 916 aa15.98■□□□□ 0.15
ATG4B-208ENST00000419606 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
ATG4B-208ENST00000419606 RPGRQ92834 1020 aaKnown RBP15.98■□□□□ 0.15
ATG4B-208ENST00000419606 PUS3Q9BZE2 481 aaKnown RBP15.98■□□□□ 0.15
ATG4B-208ENST00000419606 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
ATG4B-208ENST00000419606 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 H0YIN7 160 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 NPR1P16066 1061 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 KCNA3P22001 575 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
ATG4B-208ENST00000419606 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 SIL1Q9H173 461 aa15.97■□□□□ 0.15
ATG4B-208ENST00000419606 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
ATG4B-208ENST00000419606 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.15
ATG4B-208ENST00000419606 LRRC24Q50LG9 513 aa15.96■□□□□ 0.15
ATG4B-208ENST00000419606 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■□□□ 12.8
ATG4B-208ENST00000419606 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
ATG4B-208ENST00000419606 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
ATG4B-208ENST00000419606 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
ATG4B-208ENST00000419606 EXOC6BQ9Y2D4 811 aa15.96■□□□□ 0.15
ATG4B-208ENST00000419606 LRP5O75197 1615 aa15.96■□□□□ 0.15
ATG4B-208ENST00000419606 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
ATG4B-208ENST00000419606 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
ATG4B-208ENST00000419606 FHDC1Q9C0D6 1143 aaPredicted RBP15.95■□□□□ 0.14
ATG4B-208ENST00000419606 COPRSQ9NQ92 184 aa15.95■□□□□ 0.14
ATG4B-208ENST00000419606 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
ATG4B-208ENST00000419606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
ATG4B-208ENST00000419606 SLX4Q8IY92 1834 aa15.95■□□□□ 0.14
ATG4B-208ENST00000419606 HMMRO75330 724 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 SURF6O75683 361 aaKnown RBP15.94■□□□□ 0.14
ATG4B-208ENST00000419606 TGFB2P61812 414 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
ATG4B-208ENST00000419606 GRAPQ13588 217 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 STYK1Q6J9G0 422 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
ATG4B-208ENST00000419606 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
ATG4B-208ENST00000419606 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
ATG4B-208ENST00000419606 BRCA1P38398 1863 aaKnown RBP15.93■□□□□ 0.14
ATG4B-208ENST00000419606 APBB1O00213 710 aa15.93■□□□□ 0.14
ATG4B-208ENST00000419606 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
ATG4B-208ENST00000419606 LDHAL6AQ6ZMR3 332 aa15.93■□□□□ 0.14
ATG4B-208ENST00000419606 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
ATG4B-208ENST00000419606 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
ATG4B-208ENST00000419606 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
ATG4B-208ENST00000419606 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
ATG4B-208ENST00000419606 A0A1B0GUL6 1792 aa15.92■□□□□ 0.14
ATG4B-208ENST00000419606 EYA2O00167 538 aa15.92■□□□□ 0.14
ATG4B-208ENST00000419606 IGHMBP2P38935 993 aaKnown RBP15.92■□□□□ 0.14
ATG4B-208ENST00000419606 RIPOR2Q9Y4F9 1068 aa15.92■□□□□ 0.14
ATG4B-208ENST00000419606 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-208ENST00000419606 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-208ENST00000419606 SASH1O94885 1247 aa15.91■□□□□ 0.14
ATG4B-208ENST00000419606 PRPF40BQ6NWY9 871 aaKnown RBP15.91■□□□□ 0.14
ATG4B-208ENST00000419606 HELBQ8NG08 1087 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-208ENST00000419606 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
ATG4B-208ENST00000419606 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms