RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FAM196AQ6ZSG2 479 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.892e-6■■■■□ 20.4
HMGN1-205ENST00000419378 NLRP2Q9NX02 1062 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 KIF7Q2M1P5 1343 aa9.51□□□□□ -0.89
HMGN1-205ENST00000419378 LTV1Q96GA3 475 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-205ENST00000419378 PANK3Q9H999 370 aa9.5□□□□□ -0.89
HMGN1-205ENST00000419378 FLT4P35916 1363 aa9.5□□□□□ -0.89
HMGN1-205ENST00000419378 KIF24Q5T7B8 1368 aa9.5□□□□□ -0.89
HMGN1-205ENST00000419378 TRIM37O94972 964 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 BAG6P46379 1132 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 PTK2Q05397 1052 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 RGPD2P0DJD1 1756 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 INSRP06213 1382 aa9.49□□□□□ -0.89
HMGN1-205ENST00000419378 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
HMGN1-205ENST00000419378 IL2RBP14784 551 aa9.48□□□□□ -0.89
HMGN1-205ENST00000419378 MARCH10Q8NA82 808 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-205ENST00000419378 BAP1Q92560 729 aa9.48□□□□□ -0.89
HMGN1-205ENST00000419378 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
HMGN1-205ENST00000419378 NSD2O96028 1365 aa9.48□□□□□ -0.89
HMGN1-205ENST00000419378 BCL9O00512 1426 aa9.48□□□□□ -0.89
HMGN1-205ENST00000419378 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
HMGN1-205ENST00000419378 MEGF6O75095 1541 aa9.46□□□□□ -0.89
HMGN1-205ENST00000419378 EXOC5O00471 708 aa9.46□□□□□ -0.9
HMGN1-205ENST00000419378 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
HMGN1-205ENST00000419378 MAP2P11137 1827 aaKnown RBP9.46□□□□□ -0.9
HMGN1-205ENST00000419378 RREB1Q92766 1687 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-205ENST00000419378 APBA3O96018 575 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 PPP1R12CQ9BZL4 782 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 POLKQ9UBT6 870 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 WASHC2AQ641Q2 1341 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 PARD3Q8TEW0 1356 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 RGPD3A6NKT7 1758 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-205ENST00000419378 RGPD4Q7Z3J3 1758 aa9.45□□□□□ -0.9
HMGN1-205ENST00000419378 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-205ENST00000419378 GGCXP38435 758 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 TNNT2P45379 298 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-205ENST00000419378 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
HMGN1-205ENST00000419378 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 CAMKK2Q96RR4 588 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 TFIP11Q9UBB9 837 aaKnown RBP9.44□□□□□ -0.9
HMGN1-205ENST00000419378 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 NCAPD2Q15021 1401 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
HMGN1-205ENST00000419378 MAGEB6P1A0A0J9YX57 407 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 RFX1P22670 979 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 AGERQ15109 404 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 PTF1AQ7RTS3 328 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 ANKLE1Q8NAG6 615 aa9.43□□□□□ -0.9
HMGN1-205ENST00000419378 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
HMGN1-205ENST00000419378 SH3RF1Q7Z6J0 888 aa9.42□□□□□ -0.9
HMGN1-205ENST00000419378 MORC1Q86VD1 984 aa9.42□□□□□ -0.9
HMGN1-205ENST00000419378 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
HMGN1-205ENST00000419378 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-205ENST00000419378 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-205ENST00000419378 SH3BP2P78314 561 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 TBC1D9Q6ZT07 1266 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-205ENST00000419378 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
HMGN1-205ENST00000419378 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
HMGN1-205ENST00000419378 RAPGEF4Q8WZA2 1011 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 DOT1LQ8TEK3 1739 aa9.41□□□□□ -0.9
HMGN1-205ENST00000419378 KCNQ2O43526 872 aa9.4□□□□□ -0.9
HMGN1-205ENST00000419378 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-205ENST00000419378 EIF4A2Q14240 407 aaKnown RBP9.4□□□□□ -0.9
HMGN1-205ENST00000419378 ACSBG1Q96GR2 724 aa9.4□□□□□ -0.9
HMGN1-205ENST00000419378 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
HMGN1-205ENST00000419378 BTAF1O14981 1849 aa9.4□□□□□ -0.91
HMGN1-205ENST00000419378 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
HMGN1-205ENST00000419378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-205ENST00000419378 PLSCR1O15162 318 aa9.39□□□□□ -0.91
HMGN1-205ENST00000419378 TRIM32Q13049 653 aa9.39□□□□□ -0.91
HMGN1-205ENST00000419378 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
HMGN1-205ENST00000419378 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
HMGN1-205ENST00000419378 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
HMGN1-205ENST00000419378 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
HMGN1-205ENST00000419378 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
HMGN1-205ENST00000419378 ATP9BO43861 1147 aa9.38□□□□□ -0.91
HMGN1-205ENST00000419378 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-205ENST00000419378 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms