RNA–Protein interactions for RNA: ENST00000419021.1

SEC61A2-208, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-208ENST00000419021 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 CTSWP56202 376 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 H0YIN7 160 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 MASTLQ96GX5 879 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
SEC61A2-208ENST00000419021 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
SEC61A2-208ENST00000419021 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
SEC61A2-208ENST00000419021 NPHP1O15259 732 aa12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 GREM2Q9H772 168 aa12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 PIM2Q9P1W9 311 aa12.69□□□□□ -0.38
SEC61A2-208ENST00000419021 CHD4Q14839 1912 aa12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
SEC61A2-208ENST00000419021 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 MTX1Q13505 466 aa12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 GRAPQ13588 217 aa12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 TTLL6Q8N841 843 aa12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 GRAPLQ8TC17 118 aaPredicted RBP12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
SEC61A2-208ENST00000419021 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 MS4A1P11836 297 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 CCDC152Q4G0S7 254 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 DALRD3Q5D0E6 543 aaKnown RBP12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 ZBTB40Q9NUA8 1239 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
SEC61A2-208ENST00000419021 GNAI3P08754 354 aa12.65□□□□□ -0.38
SEC61A2-208ENST00000419021 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
SEC61A2-208ENST00000419021 CCDC85AQ96PX6 553 aaPredicted RBP12.65□□□□□ -0.38
SEC61A2-208ENST00000419021 COL4A5P29400 1685 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 NFKBIEO00221 500 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 BBOX1O75936 387 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 ITGA6P23229 1130 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 PRELPP51888 382 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 ATP6V0A2Q9Y487 856 aa12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 SUPT16HQ9Y5B9 1047 aaKnown RBP12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
SEC61A2-208ENST00000419021 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
SEC61A2-208ENST00000419021 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
SEC61A2-208ENST00000419021 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 C21orf2O43822 256 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 GNAI2P04899 355 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 POLA2Q14181 598 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 SP8Q8IXZ3 490 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 ZNF594Q96JF6 807 aaPredicted RBP12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
SEC61A2-208ENST00000419021 PSME4Q14997 1843 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 TMC4Q7Z404 712 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 ARAP2Q8WZ64 1704 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
SEC61A2-208ENST00000419021 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 IFIT5Q13325 482 aaKnown RBP12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 KLHDC4Q8TBB5 520 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
SEC61A2-208ENST00000419021 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms