RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
LINC00404-201ENST00000418660 FZD9O00144 591 aa21.12■□□□□ 0.97
LINC00404-201ENST00000418660 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
LINC00404-201ENST00000418660 NEXNQ0ZGT2 675 aa21.11■□□□□ 0.97
LINC00404-201ENST00000418660 VPS33BQ9H267 617 aa21.11■□□□□ 0.97
LINC00404-201ENST00000418660 ZNF521Q96K83 1311 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 ZNF541Q9H0D2 1346 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 IGKV5-2P06315 115 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 FLIIQ13045 1269 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 LARGE2Q8N3Y3 721 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 MPNDQ8N594 471 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 SUPT20HQ8NEM7 779 aa21.1■□□□□ 0.97
LINC00404-201ENST00000418660 L3MBTL3Q96JM7 780 aaPredicted RBP21.1■□□□□ 0.97
LINC00404-201ENST00000418660 RTFDC1Q9BY42 306 aaPredicted RBP21.1■□□□□ 0.97
LINC00404-201ENST00000418660 APLP1P51693 650 aa21.09■□□□□ 0.97
LINC00404-201ENST00000418660 DPP8Q6V1X1 898 aaPredicted RBP21.09■□□□□ 0.97
LINC00404-201ENST00000418660 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.97
LINC00404-201ENST00000418660 PDE8AO60658 829 aa21.08■□□□□ 0.97
LINC00404-201ENST00000418660 EIF6P56537 245 aaKnown RBP21.08■□□□□ 0.97
LINC00404-201ENST00000418660 JARID2Q92833 1246 aaPredicted RBP21.08■□□□□ 0.97
LINC00404-201ENST00000418660 CELF1Q92879 486 aaKnown RBP21.08■□□□□ 0.97
LINC00404-201ENST00000418660 CDHR2Q9BYE9 1310 aa21.07■□□□□ 0.96
LINC00404-201ENST00000418660 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
LINC00404-201ENST00000418660 PPIP5K2O43314 1243 aa21.07■□□□□ 0.96
LINC00404-201ENST00000418660 FKBP5Q13451 457 aaPredicted RBP21.07■□□□□ 0.96
LINC00404-201ENST00000418660 GPC2Q8N158 579 aa21.07■□□□□ 0.96
LINC00404-201ENST00000418660 COL4A5P29400 1685 aa21.07■□□□□ 0.96
LINC00404-201ENST00000418660 NEURL1BA8MQ27 555 aa21.06■□□□□ 0.96
LINC00404-201ENST00000418660 AOC3Q16853 763 aa21.06■□□□□ 0.96
LINC00404-201ENST00000418660 CCDC152Q4G0S7 254 aa21.06■□□□□ 0.96
LINC00404-201ENST00000418660 NIM1KQ8IY84 436 aa21.06■□□□□ 0.96
LINC00404-201ENST00000418660 TAF1P21675 1872 aa21.05■□□□□ 0.96
LINC00404-201ENST00000418660 RPS8P62241 208 aaKnown RBP21.05■□□□□ 0.96
LINC00404-201ENST00000418660 CWF19L2Q2TBE0 894 aaKnown RBP21.05■□□□□ 0.96
LINC00404-201ENST00000418660 DNAAF4Q8WXU2 420 aa21.05■□□□□ 0.96
LINC00404-201ENST00000418660 TAF1DQ9H5J8 278 aaPredicted RBP21.04■□□□□ 0.96
LINC00404-201ENST00000418660 LRRC37AA6NMS7 1700 aa21.04■□□□□ 0.96
LINC00404-201ENST00000418660 KIAA2012Q0VF49 1180 aa21.03■□□□□ 0.96
LINC00404-201ENST00000418660 SEC31BQ9NQW1 1179 aa21.03■□□□□ 0.96
LINC00404-201ENST00000418660 HACL1Q9UJ83 578 aa21.03■□□□□ 0.96
LINC00404-201ENST00000418660 NSFL1CQ9UNZ2 370 aaKnown RBP21.03■□□□□ 0.96
LINC00404-201ENST00000418660 SCN4AP35499 1836 aa21.03■□□□□ 0.96
LINC00404-201ENST00000418660 CACNA1FO60840 1977 aa21.03■□□□□ 0.96
LINC00404-201ENST00000418660 H7C1W4 665 aa21.02■□□□□ 0.96
LINC00404-201ENST00000418660 GCKRQ14397 625 aa21.02■□□□□ 0.96
LINC00404-201ENST00000418660 LINS1Q8NG48 757 aa21.02■□□□□ 0.96
LINC00404-201ENST00000418660 ZNRF3Q9ULT6 936 aa21.02■□□□□ 0.96
LINC00404-201ENST00000418660 GJA3Q9Y6H8 435 aa21.02■□□□□ 0.96
LINC00404-201ENST00000418660 COL4A1P02462 1669 aa21.02■□□□□ 0.95
LINC00404-201ENST00000418660 E9PSI1 815 aa21.01■□□□□ 0.95
LINC00404-201ENST00000418660 CTSWP56202 376 aa21.01■□□□□ 0.95
LINC00404-201ENST00000418660 CHADLQ6NUI6 762 aa21.01■□□□□ 0.95
LINC00404-201ENST00000418660 POTEIP0CG38 1075 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 POTEJP0CG39 1038 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 EPHX2P34913 555 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 GPSM2P81274 684 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 UBE3BQ7Z3V4 1068 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 CCDC85AQ96PX6 553 aaPredicted RBP21■□□□□ 0.95
LINC00404-201ENST00000418660 DUOX1Q9NRD9 1551 aa21■□□□□ 0.95
LINC00404-201ENST00000418660 LDHDQ86WU2 507 aa20.99■□□□□ 0.95
LINC00404-201ENST00000418660 TTLL11Q8NHH1 800 aa20.99■□□□□ 0.95
LINC00404-201ENST00000418660 F6X3S4 739 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 C6orf229H3BNL8 230 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 CXCL9Q07325 125 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 SLFN5Q08AF3 891 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 WASHC4Q2M389 1173 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 PNMA8AQ86V59 439 aaPredicted RBP20.98■□□□□ 0.95
LINC00404-201ENST00000418660 ANKRD18AQ8IVF6 992 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 DNAJC5GQ8N7S2 189 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 POLLQ9UGP5 575 aa20.98■□□□□ 0.95
LINC00404-201ENST00000418660 LMOD1P29536 600 aaPredicted RBP20.97■□□□□ 0.95
LINC00404-201ENST00000418660 CASP7P55210 303 aa20.97■□□□□ 0.95
LINC00404-201ENST00000418660 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
LINC00404-201ENST00000418660 CDC5LQ99459 802 aaKnown RBP20.97■□□□□ 0.95
LINC00404-201ENST00000418660 PLA2G12BQ9BX93 195 aa20.97■□□□□ 0.95
LINC00404-201ENST00000418660 PODXL2Q9NZ53 605 aa20.97■□□□□ 0.95
LINC00404-201ENST00000418660 RTL9Q8NET4 1388 aa20.97■□□□□ 0.95
LINC00404-201ENST00000418660 SCNN1DP51172 638 aa20.96■□□□□ 0.95
LINC00404-201ENST00000418660 BEND3Q5T5X7 828 aa20.96■□□□□ 0.95
LINC00404-201ENST00000418660 TBC1D16Q8TBP0 767 aa20.96■□□□□ 0.95
LINC00404-201ENST00000418660 EYA3Q99504 573 aa20.96■□□□□ 0.95
LINC00404-201ENST00000418660 GREM2Q9H772 168 aa20.96■□□□□ 0.95
LINC00404-201ENST00000418660 HTRA3P83110 453 aa20.95■□□□□ 0.94
LINC00404-201ENST00000418660 TNIP1Q15025 636 aa20.95■□□□□ 0.94
LINC00404-201ENST00000418660 CIAPIN1Q6FI81 312 aa20.95■□□□□ 0.94
LINC00404-201ENST00000418660 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
LINC00404-201ENST00000418660 LTBP1Q14766 1721 aa20.95■□□□□ 0.94
LINC00404-201ENST00000418660 RIMBP2O15034 1052 aa20.94■□□□□ 0.94
LINC00404-201ENST00000418660 EPS15P42566 896 aa20.94■□□□□ 0.94
LINC00404-201ENST00000418660 ANKIB1Q9P2G1 1089 aa20.94■□□□□ 0.94
LINC00404-201ENST00000418660 YDJCA8MPS7 323 aa20.93■□□□□ 0.94
LINC00404-201ENST00000418660 RAD17O75943 681 aa20.93■□□□□ 0.94
LINC00404-201ENST00000418660 CSF1RP07333 972 aa20.93■□□□□ 0.94
LINC00404-201ENST00000418660 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
LINC00404-201ENST00000418660 BSDC1Q9NW68 430 aaPredicted RBP20.93■□□□□ 0.94
LINC00404-201ENST00000418660 GGA1Q9UJY5 639 aa20.93■□□□□ 0.94
LINC00404-201ENST00000418660 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
LINC00404-201ENST00000418660 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
LINC00404-201ENST00000418660 MRPL50Q8N5N7 158 aaKnown RBP20.92■□□□□ 0.94
LINC00404-201ENST00000418660 ZC3H12CQ9C0D7 883 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms