RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 RREB1Q92766 1687 aa13.29□□□□□ -0.28
NPHP1-205ENST00000418527 NBPF7P0C2Y1 421 aaPredicted RBP13.29□□□□□ -0.28
NPHP1-205ENST00000418527 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
NPHP1-205ENST00000418527 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
NPHP1-205ENST00000418527 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
NPHP1-205ENST00000418527 NUP188Q5SRE5 1749 aa13.29□□□□□ -0.28
NPHP1-205ENST00000418527 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
NPHP1-205ENST00000418527 PLSCR1O15162 318 aa13.28□□□□□ -0.28
NPHP1-205ENST00000418527 ZPR1O75312 459 aa13.28□□□□□ -0.28
NPHP1-205ENST00000418527 TRIM28Q13263 835 aaKnown RBP13.28□□□□□ -0.28
NPHP1-205ENST00000418527 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
NPHP1-205ENST00000418527 ISCA1Q9BUE6 129 aa13.28□□□□□ -0.28
NPHP1-205ENST00000418527 UTYO14607 1347 aa13.28□□□□□ -0.28
NPHP1-205ENST00000418527 HLFQ16534 295 aa13.27□□□□□ -0.29
NPHP1-205ENST00000418527 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
NPHP1-205ENST00000418527 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
NPHP1-205ENST00000418527 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 GPTP24298 496 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 RFC4P35249 363 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
NPHP1-205ENST00000418527 NUP98P52948 1817 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 H7C1W4 665 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 SRGAP3O43295 1099 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 CAMTA2O94983 1202 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
NPHP1-205ENST00000418527 EMP3P54852 163 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 DCTPP1Q9H773 170 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
NPHP1-205ENST00000418527 PHF14O94880 888 aa13.24□□□□□ -0.29
NPHP1-205ENST00000418527 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
NPHP1-205ENST00000418527 NLRP10Q86W26 655 aa13.24□□□□□ -0.29
NPHP1-205ENST00000418527 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
NPHP1-205ENST00000418527 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
NPHP1-205ENST00000418527 LRRC4BQ9NT99 713 aa13.24□□□□□ -0.29
NPHP1-205ENST00000418527 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
NPHP1-205ENST00000418527 TRMT112Q9UI30 125 aaKnown RBP13.24□□□□□ -0.29
NPHP1-205ENST00000418527 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPHP1-205ENST00000418527 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
NPHP1-205ENST00000418527 RGS3P49796 1198 aa13.23□□□□□ -0.29
NPHP1-205ENST00000418527 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
NPHP1-205ENST00000418527 MTX1Q13505 466 aa13.23□□□□□ -0.29
NPHP1-205ENST00000418527 RTL5Q5HYW3 569 aaPredicted RBP13.23□□□□□ -0.29
NPHP1-205ENST00000418527 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
NPHP1-205ENST00000418527 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
NPHP1-205ENST00000418527 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
NPHP1-205ENST00000418527 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
NPHP1-205ENST00000418527 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
NPHP1-205ENST00000418527 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
NPHP1-205ENST00000418527 SSFA2P28290 1259 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 BAG6P46379 1132 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 NUCB1Q02818 461 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 CHD1LQ86WJ1 897 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
NPHP1-205ENST00000418527 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
NPHP1-205ENST00000418527 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
NPHP1-205ENST00000418527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.21□□□□□ -0.29
NPHP1-205ENST00000418527 FAM177BA6PVY3 158 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 APBB1O00213 710 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 RAB11FIP3O75154 756 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
NPHP1-205ENST00000418527 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
NPHP1-205ENST00000418527 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 CDHR2Q9BYE9 1310 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 TNS1Q9HBL0 1735 aaKnown RBP13.2□□□□□ -0.3
NPHP1-205ENST00000418527 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
NPHP1-205ENST00000418527 NPHP1O15259 732 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 CASP7P55210 303 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPHP1-205ENST00000418527 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
NPHP1-205ENST00000418527 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
NPHP1-205ENST00000418527 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
NPHP1-205ENST00000418527 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
NPHP1-205ENST00000418527 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
NPHP1-205ENST00000418527 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
NPHP1-205ENST00000418527 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
NPHP1-205ENST00000418527 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms