RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 TARSP26639 723 aaKnown RBP8.35□□□□□ -1.07
RFC4-204ENST00000417876 PSMD2Q13200 908 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 LBRQ14739 615 aaKnown RBP8.35□□□□□ -1.07
RFC4-204ENST00000417876 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 NUCKS1Q9H1E3 243 aaKnown RBP8.35□□□□□ -1.07
RFC4-204ENST00000417876 KCNH4Q9UQ05 1017 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 PCDHGC4Q9Y5F7 938 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 KHNYNO15037 678 aaKnown RBP8.34□□□□□ -1.07
RFC4-204ENST00000417876 SORBS3O60504 671 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 PHACTR2O75167 634 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
RFC4-204ENST00000417876 NEFLP07196 543 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
RFC4-204ENST00000417876 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
RFC4-204ENST00000417876 GNA15P30679 374 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 FGD1P98174 961 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
RFC4-204ENST00000417876 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 TRIM47Q96LD4 638 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 ZFATQ9P243 1243 aa8.34□□□□□ -1.07
RFC4-204ENST00000417876 CTSHP09668 335 aa8.33□□□□□ -1.08
RFC4-204ENST00000417876 KRT25Q7Z3Z0 450 aa8.33□□□□□ -1.08
RFC4-204ENST00000417876 TRIM22Q8IYM9 498 aa8.33□□□□□ -1.08
RFC4-204ENST00000417876 ZNF837Q96EG3 531 aaPredicted RBP8.33□□□□□ -1.08
RFC4-204ENST00000417876 C11orf16Q9NQ32 467 aa8.33□□□□□ -1.08
RFC4-204ENST00000417876 ABI2Q9NYB9 513 aaPredicted RBP8.33□□□□□ -1.08
RFC4-204ENST00000417876 AK5Q9Y6K8 562 aa8.33□□□□□ -1.08
RFC4-204ENST00000417876 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
RFC4-204ENST00000417876 ZNF775Q96BV0 537 aaPredicted RBP8.32□□□□□ -1.08
RFC4-204ENST00000417876 ABHD17AQ96GS6 310 aa8.32□□□□□ -1.08
RFC4-204ENST00000417876 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
RFC4-204ENST00000417876 NPHS2Q9NP85 383 aa8.32□□□□□ -1.08
RFC4-204ENST00000417876 MMP20O60882 483 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 ITGA6P23229 1130 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 HDLBPQ00341 1268 aaKnown RBP8.31□□□□□ -1.08
RFC4-204ENST00000417876 CCINQ13939 588 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 C9orf131Q5VYM1 1079 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
RFC4-204ENST00000417876 H7C1W4 665 aa8.3□□□□□ -1.08
RFC4-204ENST00000417876 GALNT12Q8IXK2 581 aa8.3□□□□□ -1.08
RFC4-204ENST00000417876 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
RFC4-204ENST00000417876 GTPBP3Q969Y2 492 aaKnown RBP8.3□□□□□ -1.08
RFC4-204ENST00000417876 KIFC2Q96AC6 838 aa8.3□□□□□ -1.08
RFC4-204ENST00000417876 LATS2Q9NRM7 1088 aa8.3□□□□□ -1.08
RFC4-204ENST00000417876 IGSF3O75054 1194 aa8.29□□□□□ -1.08
RFC4-204ENST00000417876 CD33P20138 364 aa8.29□□□□□ -1.08
RFC4-204ENST00000417876 TTC39BQ5VTQ0 682 aaPredicted RBP8.29□□□□□ -1.08
RFC4-204ENST00000417876 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
RFC4-204ENST00000417876 MARK1Q9P0L2 795 aa8.29□□□□□ -1.08
RFC4-204ENST00000417876 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
RFC4-204ENST00000417876 POTECB2RU33 542 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 SCAMP3O14828 347 aaKnown RBP8.28□□□□□ -1.08
RFC4-204ENST00000417876 CES1P23141 567 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 VEGFBP49765 207 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 LAMC2Q13753 1193 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 COL13A1Q5TAT6 717 aaPredicted RBP8.28□□□□□ -1.08
RFC4-204ENST00000417876 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
RFC4-204ENST00000417876 METTL16Q86W50 562 aaKnown RBP8.28□□□□□ -1.08
RFC4-204ENST00000417876 OR13H1Q8NG92 308 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
RFC4-204ENST00000417876 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 RARAP10276 462 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 NFKB1P19838 968 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 FANCCQ00597 558 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 CTBSQ01459 385 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 FRMD6Q96NE9 622 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
RFC4-204ENST00000417876 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
RFC4-204ENST00000417876 GPR25O00155 361 aa8.26□□□□□ -1.09
RFC4-204ENST00000417876 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
RFC4-204ENST00000417876 RAD51AP2Q09MP3 1159 aa8.26□□□□□ -1.09
RFC4-204ENST00000417876 GLIS3Q8NEA6 775 aa8.26□□□□□ -1.09
RFC4-204ENST00000417876 BCO2Q9BYV7 579 aa8.26□□□□□ -1.09
RFC4-204ENST00000417876 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
RFC4-204ENST00000417876 A0A1W2PP55 124 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 ACPPP15309 386 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 GRM2Q14416 872 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 VWA5B2Q8N398 1253 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 BHMTQ93088 406 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 PMEPA1Q969W9 287 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
RFC4-204ENST00000417876 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
RFC4-204ENST00000417876 ATXN7L1Q9ULK2 861 aaPredicted RBP8.25□□□□□ -1.09
RFC4-204ENST00000417876 C2CD2LO14523 706 aa8.24□□□□□ -1.09
RFC4-204ENST00000417876 FGFR3P22607 806 aa8.24□□□□□ -1.09
RFC4-204ENST00000417876 MEI1Q5TIA1 1274 aa8.24□□□□□ -1.09
RFC4-204ENST00000417876 CRELD1Q96HD1 420 aa8.24□□□□□ -1.09
RFC4-204ENST00000417876 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
RFC4-204ENST00000417876 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms