RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CFAP44Q96MT7 982 aa10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 ZNF408Q9H9D4 720 aa10.36□□□□□ -0.75
HLA-DPA1-241ENST00000417724 ABCC4O15439 1325 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 H7C1D1 291 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 RAD17O75943 681 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 HIRAP54198 1017 aaPredicted RBP10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 NOGQ13253 232 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 HSP90AB3PQ58FF7 597 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 MCOLN1Q9GZU1 580 aa10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CNOT7Q9UIV1 285 aaKnown RBP10.35□□□□□ -0.75
HLA-DPA1-241ENST00000417724 MAPK8IP3Q9UPT6 1336 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 HCLS1P14317 486 aaPredicted RBP10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 DGKZQ13574 1117 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 PDIA6Q15084 440 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 TRMT112Q9UI30 125 aaKnown RBP10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
HLA-DPA1-241ENST00000417724 HUNKP57058 714 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 GRAPQ13588 217 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 USP48Q86UV5 1035 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 GRAPLQ8TC17 118 aaPredicted RBP10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 DPF2Q92785 391 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 BABAM1Q9NWV8 329 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 POLR2AP24928 1970 aaKnown RBP10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
HLA-DPA1-241ENST00000417724 AIMP1Q12904 312 aaKnown RBP10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 PROSER3Q2NL68 480 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 MICALL2Q8IY33 904 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 C2orf69Q8N8R5 385 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 TRPM4Q8TD43 1214 aa10.32□□□□□ -0.76
HLA-DPA1-241ENST00000417724 LAMB2P55268 1798 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 YDJCA8MPS7 323 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ANXA1P04083 346 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 RIPK4P57078 832 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 RGMBQ6NW40 437 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 KRT26Q7Z3Y9 468 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 XAGE3Q8WTP9 111 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 DCPSQ96C86 337 aaKnown RBP10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 NSFL1CQ9UNZ2 370 aaKnown RBP10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 PDE4DIPQ5VU43 2346 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 TAF1P21675 1872 aa10.31□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 PSMD14O00487 310 aa10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 RPS12P25398 132 aaKnown RBP10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ZIC5Q96T25 663 aa10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
HLA-DPA1-241ENST00000417724 AKAP11Q9UKA4 1901 aa10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SAGE1Q9NXZ1 904 aa10.29□□□□□ -0.76
HLA-DPA1-241ENST00000417724 FAM155AB1AL88 458 aaPredicted RBP10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ZNF157P51786 506 aaPredicted RBP10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 DLK2Q6UY11 383 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ANKRD13DQ6ZTN6 518 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 EYA3Q99504 573 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 DBNDD1Q9H9R9 158 aa10.28□□□□□ -0.76
HLA-DPA1-241ENST00000417724 ECE2O60344 883 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 TRPA1O75762 1119 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 FAM89AQ96GI7 184 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 ZC3H12CQ9C0D7 883 aaKnown RBP10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RNF186Q9NXI6 227 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 POLLQ9UGP5 575 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 LRRC37AA6NMS7 1700 aa10.27□□□□□ -0.77
HLA-DPA1-241ENST00000417724 G3V3G9 751 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 EGFRP00533 1210 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 RPS8P62241 208 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 GPSM2P81274 684 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 KCNQ5Q9NR82 932 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 CHPF2Q9P2E5 772 aa10.26□□□□□ -0.77
HLA-DPA1-241ENST00000417724 DUOX1Q9NRD9 1551 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms