RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
TRIM48-201ENST00000417545 CACNA1SQ13698 1873 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 H0YIN7 160 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 ZBTB7BO15156 539 aaPredicted RBP10.57□□□□□ -0.72
TRIM48-201ENST00000417545 AAMPQ13685 434 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 DDX46Q7L014 1031 aaKnown RBP10.57□□□□□ -0.72
TRIM48-201ENST00000417545 C2CD5Q86YS7 1000 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 EXOC6Q8TAG9 804 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 BRIP1Q9BX63 1249 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
TRIM48-201ENST00000417545 PDZRN3Q9UPQ7 1066 aa10.57□□□□□ -0.72
TRIM48-201ENST00000417545 UTYO14607 1347 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 SPEF2Q9C093 1822 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 HMMRO75330 724 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 LMBR1LQ6UX01 489 aa10.56□□□□□ -0.72
TRIM48-201ENST00000417545 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM48-201ENST00000417545 RBM17Q96I25 401 aaKnown RBP10.56□□□□□ -0.72
TRIM48-201ENST00000417545 BICC1Q9H694 974 aaKnown RBP10.56□□□□□ -0.72
TRIM48-201ENST00000417545 KIF13BQ9NQT8 1826 aa10.55□□□□□ -0.72
TRIM48-201ENST00000417545 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
TRIM48-201ENST00000417545 IFIT5Q13325 482 aaKnown RBP10.55□□□□□ -0.72
TRIM48-201ENST00000417545 SLC10A5Q5PT55 438 aa10.55□□□□□ -0.72
TRIM48-201ENST00000417545 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
TRIM48-201ENST00000417545 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
TRIM48-201ENST00000417545 COL11A2P13942 1736 aaPredicted RBP10.55□□□□□ -0.72
TRIM48-201ENST00000417545 SRGAP3O43295 1099 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 NPR1P16066 1061 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
TRIM48-201ENST00000417545 PTGER2P43116 358 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 CASP7P55210 303 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 OS9Q13438 667 aaPredicted RBP10.54□□□□□ -0.72
TRIM48-201ENST00000417545 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 PIP4P2Q8N4L2 257 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 LRP5O75197 1615 aa10.54□□□□□ -0.72
TRIM48-201ENST00000417545 DLEC1Q9Y238 1755 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 RPAP2Q8IXW5 612 aaPredicted RBP10.53□□□□□ -0.72
TRIM48-201ENST00000417545 TTLL11Q8NHH1 800 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 MASTLQ96GX5 879 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 MPHOSPH8Q99549 860 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
TRIM48-201ENST00000417545 CD2APQ9Y5K6 639 aa10.53□□□□□ -0.72
TRIM48-201ENST00000417545 ITGA6P23229 1130 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 CHRNA5P30532 468 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 TGFB2P61812 414 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 FOXO4P98177 505 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 SF3B3Q15393 1217 aaKnown RBP10.52□□□□□ -0.73
TRIM48-201ENST00000417545 EPHA10Q5JZY3 1008 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 CNKSR1Q969H4 720 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 SGIP1Q9BQI5 828 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 GREM2Q9H772 168 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
TRIM48-201ENST00000417545 A0A0G2JLW4 131 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 GRAPQ13588 217 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 RABL6Q3YEC7 729 aaPredicted RBP10.51□□□□□ -0.73
TRIM48-201ENST00000417545 STYK1Q6J9G0 422 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
TRIM48-201ENST00000417545 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 GRAPLQ8TC17 118 aaPredicted RBP10.51□□□□□ -0.73
TRIM48-201ENST00000417545 FHDC1Q9C0D6 1143 aaPredicted RBP10.51□□□□□ -0.73
TRIM48-201ENST00000417545 CNNM1Q9NRU3 951 aa10.51□□□□□ -0.73
TRIM48-201ENST00000417545 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
TRIM48-201ENST00000417545 CSF1RP07333 972 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 SRGNP10124 158 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 DPEP1P16444 411 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 ATP8B2P98198 1209 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 G3BP1Q13283 466 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM48-201ENST00000417545 SIL1Q9H173 461 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 RWDD1Q9H446 243 aaPredicted RBP10.5□□□□□ -0.73
TRIM48-201ENST00000417545 SEC31BQ9NQW1 1179 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 PIM2Q9P1W9 311 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 WWC3Q9ULE0 1092 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 RTL9Q8NET4 1388 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 TAF1P21675 1872 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 HAX1O00165 279 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
TRIM48-201ENST00000417545 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 HSP90AB4PQ58FF6 505 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 ERICH6BQ5W0A0 696 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 LDHAL6AQ6ZMR3 332 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 TTLL6Q8N841 843 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 KAZALD1Q96I82 304 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 CCDC136Q96JN2 1154 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 CRAMP1Q96RY5 1269 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
TRIM48-201ENST00000417545 PNMA6EA0A0J9YXQ4 647 aa10.49□□□□□ -0.73
TRIM48-201ENST00000417545 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
TRIM48-201ENST00000417545 KCNJ4P48050 445 aa10.49□□□□□ -0.73
TRIM48-201ENST00000417545 RPS8P62241 208 aaKnown RBP10.49□□□□□ -0.73
TRIM48-201ENST00000417545 MTX1Q13505 466 aa10.49□□□□□ -0.73
TRIM48-201ENST00000417545 DALRD3Q5D0E6 543 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms