RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 GPLD1P80108 840 aa7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 TRPM4Q8TD43 1214 aa7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 ZNF594Q96JF6 807 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 C2orf49Q9BVC5 232 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 C11orf16Q9NQ32 467 aa7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 MKRN1Q9UHC7 482 aaKnown RBP7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 RAXQ9Y2V3 346 aa7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 DHX15O43143 795 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 ARSDP51689 593 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 GP2P55259 537 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 CLDN10P78369 228 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 MLLT1Q03111 559 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 MCM6Q14566 821 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 DZIP1LQ8IYY4 767 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 HINFPQ9BQA5 517 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 KIAA1024Q9UPX6 916 aa7.16□□□□□ -1.26
TRAPPC13-203ENST00000415825 DLL1O00548 723 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 ZBTB7BO15156 539 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 SEC13P55735 322 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 SIX5Q8N196 739 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 CEP41Q9BYV8 373 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
TRAPPC13-203ENST00000415825 PSAPP07602 524 aa7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 IDH3AP50213 366 aa7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 NRLP54845 237 aa7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 GDF6Q6KF10 455 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 CACTIN-AS1Q8N1I8 211 aa7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
TRAPPC13-203ENST00000415825 FAM177BA6PVY3 158 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 ATP9BO43861 1147 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 ALX3O95076 343 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 RASA1P20936 1047 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 GRIK5Q16478 980 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 HFE2Q6ZVN8 426 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 IL22RA1Q8N6P7 574 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 PLD4Q96BZ4 506 aa7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.13□□□□□ -1.27
TRAPPC13-203ENST00000415825 DEAF1O75398 565 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 SASH3O75995 380 aa7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 TARSP26639 723 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 PLAURQ03405 335 aa7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 FZD5Q13467 585 aa7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 ILDR2Q71H61 639 aa7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 OAS3Q9Y6K5 1087 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-203ENST00000415825 KIAA1324LA8MWY0 1029 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC13-203ENST00000415825 C21orf2O43822 256 aa7.11□□□□□ -1.27
TRAPPC13-203ENST00000415825 TGFB1P01137 390 aa7.11□□□□□ -1.27
TRAPPC13-203ENST00000415825 SLC24A1O60721 1099 aa7.1□□□□□ -1.27
TRAPPC13-203ENST00000415825 WNT11O96014 354 aa7.1□□□□□ -1.27
TRAPPC13-203ENST00000415825 INPP5BP32019 993 aa7.1□□□□□ -1.27
TRAPPC13-203ENST00000415825 ZBTB42B2RXF5 422 aa7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 FAM117BQ6P1L5 589 aa7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 UTP4Q969X6 686 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 IFT43Q96FT9 208 aa7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 TLR7Q9NYK1 1049 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 ZFATQ9P243 1243 aa7.09□□□□□ -1.27
TRAPPC13-203ENST00000415825 LOC102724428A0A0B4J2F2 783 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 MICAL2O94851 1124 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 SIK1P57059 783 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 DGKZQ13574 1117 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 HDGFL1Q5TGJ6 251 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 GIMAP7Q8NHV1 300 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 SPACA7Q96KW9 195 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 KLK14Q9P0G3 267 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 PPME1Q9Y570 386 aa7.08□□□□□ -1.28
TRAPPC13-203ENST00000415825 SART1O43290 800 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 XYLBO75191 536 aa7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 IGFBP4P22692 258 aa7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 NFIAQ12857 509 aa7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 AGGF1Q8N302 714 aaeCLIP7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 DMGDHQ9UI17 866 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-203ENST00000415825 C11orf91Q3C1V1 193 aa7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 ACAD11Q709F0 780 aa7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 CMTR1Q8N1G2 835 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 NSUN5Q96P11 429 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 DBNDD2Q9BQY9 259 aa7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 ANGEL1Q9UNK9 670 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-203ENST00000415825 J3QW42 95 aa7.05□□□□□ -1.28
TRAPPC13-203ENST00000415825 Q6ZS46 218 aa7.05□□□□□ -1.28
TRAPPC13-203ENST00000415825 BCS1LQ9Y276 419 aa7.05□□□□□ -1.28
TRAPPC13-203ENST00000415825 RTCBQ9Y3I0 505 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-203ENST00000415825 UBTFP17480 764 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 SOX18P35713 384 aa7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 RGL4Q8IZJ4 473 aa7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
TRAPPC13-203ENST00000415825 SMNDC1O75940 238 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRAPPC13-203ENST00000415825 MED26O95402 600 aa7.03□□□□□ -1.28
TRAPPC13-203ENST00000415825 CD68P34810 354 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-203ENST00000415825 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms