RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TNIP1Q15025 636 aa20.23■□□□□ 0.83
DDX56-202ENST00000415758 PAXIP1Q6ZW49 1069 aaPredicted RBP20.23■□□□□ 0.83
DDX56-202ENST00000415758 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
DDX56-202ENST00000415758 ANXA1P04083 346 aa20.22■□□□□ 0.83
DDX56-202ENST00000415758 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
DDX56-202ENST00000415758 CIAPIN1Q6FI81 312 aa20.22■□□□□ 0.83
DDX56-202ENST00000415758 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
DDX56-202ENST00000415758 GRAPQ13588 217 aa20.21■□□□□ 0.83
DDX56-202ENST00000415758 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
DDX56-202ENST00000415758 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
DDX56-202ENST00000415758 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
DDX56-202ENST00000415758 CELF2O95319 508 aaKnown RBP20.2■□□□□ 0.82
DDX56-202ENST00000415758 HIRAP54198 1017 aaPredicted RBP20.2■□□□□ 0.82
DDX56-202ENST00000415758 GRM1Q13255 1194 aa20.2■□□□□ 0.82
DDX56-202ENST00000415758 XAGE3Q8WTP9 111 aa20.2■□□□□ 0.82
DDX56-202ENST00000415758 TRMT112Q9UI30 125 aaKnown RBP20.2■□□□□ 0.82
DDX56-202ENST00000415758 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
DDX56-202ENST00000415758 CA12O43570 354 aa20.19■□□□□ 0.82
DDX56-202ENST00000415758 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
DDX56-202ENST00000415758 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
DDX56-202ENST00000415758 BCL2L13Q9BXK5 485 aa20.19■□□□□ 0.82
DDX56-202ENST00000415758 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
DDX56-202ENST00000415758 AOC2O75106 756 aa20.18■□□□□ 0.82
DDX56-202ENST00000415758 RAD17O75943 681 aa20.18■□□□□ 0.82
DDX56-202ENST00000415758 AIMP1Q12904 312 aaKnown RBP20.18■□□□□ 0.82
DDX56-202ENST00000415758 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
DDX56-202ENST00000415758 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
DDX56-202ENST00000415758 TAF1P21675 1872 aa20.18■□□□□ 0.82
DDX56-202ENST00000415758 LRRC37AA6NMS7 1700 aa20.17■□□□□ 0.82
DDX56-202ENST00000415758 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
DDX56-202ENST00000415758 CHL1O00533 1208 aa20.17■□□□□ 0.82
DDX56-202ENST00000415758 RGS19P49795 217 aa20.17■□□□□ 0.82
DDX56-202ENST00000415758 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
DDX56-202ENST00000415758 DUOX1Q9NRD9 1551 aa20.17■□□□□ 0.82
DDX56-202ENST00000415758 DPF2Q92785 391 aa20.16■□□□□ 0.82
DDX56-202ENST00000415758 H7C1D1 291 aa20.15■□□□□ 0.82
DDX56-202ENST00000415758 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
DDX56-202ENST00000415758 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
DDX56-202ENST00000415758 RALBP1Q15311 655 aa20.14■□□□□ 0.81
DDX56-202ENST00000415758 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
DDX56-202ENST00000415758 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
DDX56-202ENST00000415758 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
DDX56-202ENST00000415758 CCDC85CA6NKD9 419 aa20.13■□□□□ 0.81
DDX56-202ENST00000415758 WASHC4Q2M389 1173 aa20.13■□□□□ 0.81
DDX56-202ENST00000415758 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
DDX56-202ENST00000415758 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
DDX56-202ENST00000415758 TSKSQ9UJT2 592 aa20.13■□□□□ 0.81
DDX56-202ENST00000415758 SHTN1A0MZ66 631 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 HOXB7P09629 217 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 ANKRD13DQ6ZTN6 518 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 MICALL2Q8IY33 904 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 CHPF2Q9P2E5 772 aa20.12■□□□□ 0.81
DDX56-202ENST00000415758 NOGQ13253 232 aa20.11■□□□□ 0.81
DDX56-202ENST00000415758 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
DDX56-202ENST00000415758 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
DDX56-202ENST00000415758 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
DDX56-202ENST00000415758 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
DDX56-202ENST00000415758 CASP8AP2Q9UKL3 1982 aa20.11■□□□□ 0.81
DDX56-202ENST00000415758 PSMD14O00487 310 aa20.1■□□□□ 0.81
DDX56-202ENST00000415758 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
DDX56-202ENST00000415758 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
DDX56-202ENST00000415758 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
DDX56-202ENST00000415758 CELF1Q92879 486 aaKnown RBP20.1■□□□□ 0.81
DDX56-202ENST00000415758 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
DDX56-202ENST00000415758 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
DDX56-202ENST00000415758 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
DDX56-202ENST00000415758 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
DDX56-202ENST00000415758 SAMD7Q7Z3H4 446 aa20.09■□□□□ 0.81
DDX56-202ENST00000415758 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
DDX56-202ENST00000415758 HUNKP57058 714 aa20.08■□□□□ 0.81
DDX56-202ENST00000415758 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
DDX56-202ENST00000415758 MCOLN1Q9GZU1 580 aa20.08■□□□□ 0.81
DDX56-202ENST00000415758 DBNDD1Q9H9R9 158 aa20.08■□□□□ 0.81
DDX56-202ENST00000415758 SLC34A2O95436 690 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 GPSM2P81274 684 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 ZIC5Q96T25 663 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 EYA3Q99504 573 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 HYPKQ9NX55 129 aa20.07■□□□□ 0.8
DDX56-202ENST00000415758 FAM155AB1AL88 458 aaPredicted RBP20.06■□□□□ 0.8
DDX56-202ENST00000415758 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 C6orf229H3BNL8 230 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 EGFRP00533 1210 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
DDX56-202ENST00000415758 TBC1D10BQ4KMP7 808 aaPredicted RBP20.06■□□□□ 0.8
DDX56-202ENST00000415758 RGMBQ6NW40 437 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 RUNDC1Q96C34 613 aa20.06■□□□□ 0.8
DDX56-202ENST00000415758 RIMBP2O15034 1052 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 ECE2O60344 883 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 DLK2Q6UY11 383 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 TBC1D16Q8TBP0 767 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 KCNQ5Q9NR82 932 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 PODXL2Q9NZ53 605 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
DDX56-202ENST00000415758 COL4A1P02462 1669 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
DDX56-202ENST00000415758 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms