RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 C4AP0C0L4 1744 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 SASH1O94885 1247 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 RXRBP28702 533 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 DDIT3P35638 169 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 FAM89AQ96GI7 184 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 TRMT112Q9UI30 125 aaKnown RBP14.06□□□□□ -0.16
RFFL-205ENST00000415395 COL24A1Q17RW2 1714 aa14.06□□□□□ -0.16
RFFL-205ENST00000415395 DDX60Q8IY21 1712 aaKnown RBP14.05□□□□□ -0.16
RFFL-205ENST00000415395 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
RFFL-205ENST00000415395 PDE8AO60658 829 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 CIAO1O76071 339 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
RFFL-205ENST00000415395 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
RFFL-205ENST00000415395 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
RFFL-205ENST00000415395 RGPD4Q7Z3J3 1758 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 UBR3Q6ZT12 1888 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 SH3TC1Q8TE82 1336 aa14.05□□□□□ -0.16
RFFL-205ENST00000415395 ERC2O15083 957 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
RFFL-205ENST00000415395 SDSP20132 328 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 CASC1Q6TDU7 716 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 UTP14AQ9BVJ6 771 aaKnown RBP14.04□□□□□ -0.16
RFFL-205ENST00000415395 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 IRS4O14654 1257 aaPredicted RBP14.04□□□□□ -0.16
RFFL-205ENST00000415395 GNPATO15228 680 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 ADRA2BP18089 450 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 IL15P40933 162 aaPredicted RBP14.04□□□□□ -0.16
RFFL-205ENST00000415395 TBC1D9Q6ZT07 1266 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 SIL1Q9H173 461 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 GPR108Q9NPR9 543 aa14.04□□□□□ -0.16
RFFL-205ENST00000415395 GLRX3O76003 335 aaKnown RBP14.03□□□□□ -0.16
RFFL-205ENST00000415395 CTSWP56202 376 aa14.03□□□□□ -0.16
RFFL-205ENST00000415395 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
RFFL-205ENST00000415395 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
RFFL-205ENST00000415395 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
RFFL-205ENST00000415395 NIP7Q9Y221 180 aaKnown RBP eCLIP14.03□□□□□ -0.16
RFFL-205ENST00000415395 EYA2O00167 538 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 KCNQ4P56696 695 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 IFIT5Q13325 482 aaKnown RBP14.02□□□□□ -0.16
RFFL-205ENST00000415395 RABEP1Q15276 862 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 SUSD4Q5VX71 490 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 AACSQ86V21 672 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 GZF1Q9H116 711 aaPredicted RBP14.02□□□□□ -0.16
RFFL-205ENST00000415395 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.16
RFFL-205ENST00000415395 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.02□□□□□ -0.16
RFFL-205ENST00000415395 LRP5O75197 1615 aa14.02□□□□□ -0.17
RFFL-205ENST00000415395 RTL9Q8NET4 1388 aa14.02□□□□□ -0.17
RFFL-205ENST00000415395 TRIM37O94972 964 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 NTSR2O95665 410 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 TNPO1Q92973 898 aaKnown RBP14.01□□□□□ -0.17
RFFL-205ENST00000415395 PLSCR1O15162 318 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 ZPR1O75312 459 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 CLCN1P35523 988 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 ATG9AQ7Z3C6 839 aa14.01□□□□□ -0.17
RFFL-205ENST00000415395 ANP32BQ92688 251 aaKnown RBP14.01□□□□□ -0.17
RFFL-205ENST00000415395 EAF2Q96CJ1 260 aaPredicted RBP14.01□□□□□ -0.17
RFFL-205ENST00000415395 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
RFFL-205ENST00000415395 TNS1Q9HBL0 1735 aaKnown RBP14□□□□□ -0.17
RFFL-205ENST00000415395 CASZ1Q86V15 1759 aa14□□□□□ -0.17
RFFL-205ENST00000415395 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
RFFL-205ENST00000415395 TNNI3KQ59H18 835 aa14□□□□□ -0.17
RFFL-205ENST00000415395 NYXQ9GZU5 481 aa14□□□□□ -0.17
RFFL-205ENST00000415395 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
RFFL-205ENST00000415395 FPGT-TNNI3KV9GXZ4 949 aa14□□□□□ -0.17
RFFL-205ENST00000415395 NUCB2P80303 420 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 TFCP2Q12800 502 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
RFFL-205ENST00000415395 TRIM6-TRIM34B2RNG4 842 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 ITGA6P23229 1130 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 SSFA2P28290 1259 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 TSHZ3Q63HK5 1081 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 SYNE4Q8N205 404 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
RFFL-205ENST00000415395 BCL2L12Q9HB09 334 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 ZNF609O15014 1411 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 RFC4P35249 363 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 GREM2Q9H772 168 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 RRAGDQ9NQL2 400 aaPredicted RBP13.98□□□□□ -0.17
RFFL-205ENST00000415395 RGS17Q9UGC6 210 aaPredicted RBP13.98□□□□□ -0.17
RFFL-205ENST00000415395 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
RFFL-205ENST00000415395 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
RFFL-205ENST00000415395 SLC10A5Q5PT55 438 aa13.97□□□□□ -0.17
RFFL-205ENST00000415395 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
RFFL-205ENST00000415395 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
RFFL-205ENST00000415395 CEP126Q9P2H0 1117 aa13.97□□□□□ -0.17
RFFL-205ENST00000415395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
RFFL-205ENST00000415395 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
RFFL-205ENST00000415395 EPB41L2O43491 1005 aaKnown RBP13.96□□□□□ -0.17
RFFL-205ENST00000415395 REC8O95072 547 aa13.96□□□□□ -0.17
RFFL-205ENST00000415395 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms