RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MVPQ14764 893 aaKnown RBP21.1■□□□□ 0.97
SHANK3-202ENST00000414786 RRAGBQ5VZM2 374 aa21.1■□□□□ 0.97
SHANK3-202ENST00000414786 DAAM2Q86T65 1068 aa21.1■□□□□ 0.97
SHANK3-202ENST00000414786 EPSTI1Q96J88 318 aa21.1■□□□□ 0.97
SHANK3-202ENST00000414786 LMOD1P29536 600 aaPredicted RBP21.1■□□□□ 0.97
SHANK3-202ENST00000414786 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 CCDC114Q96M63 670 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 ERCC3P19447 782 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 RPUSD2Q8IZ73 545 aaKnown RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 FAM169AQ9Y6X4 670 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 CEBPAP49715 358 aaPredicted RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 CYP7A1P22680 504 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 PSMD6Q15008 389 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 RNF41Q9H4P4 317 aaPredicted RBP21.09■□□□□ 0.97
SHANK3-202ENST00000414786 TXNDC16Q9P2K2 825 aa21.09■□□□□ 0.97
SHANK3-202ENST00000414786 IARSP41252 1262 aaKnown RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 GPIHBP1Q8IV16 184 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 CEP112Q8N8E3 955 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 NAA15Q9BXJ9 866 aaKnown RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 KRT5P13647 590 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 STAT6P42226 847 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 CCT6BQ92526 530 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 GBP3Q9H0R5 595 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 EAPPQ56P03 285 aaPredicted RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 IFIT1BQ5T764 474 aaKnown RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 CAPZA3Q96KX2 299 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 SETDB2Q96T68 719 aa21.08■□□□□ 0.97
SHANK3-202ENST00000414786 PPANQ9NQ55 473 aaKnown RBP21.08■□□□□ 0.97
SHANK3-202ENST00000414786 IMPG2Q9BZV3 1241 aa21.08■□□□□ 0.96
SHANK3-202ENST00000414786 DNAJC21Q5F1R6 531 aaKnown RBP21.08■□□□□ 0.96
SHANK3-202ENST00000414786 USP25Q9UHP3 1055 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 SAP30BPQ9UHR5 308 aaKnown RBP21.07■□□□□ 0.96
SHANK3-202ENST00000414786 PPME1Q9Y570 386 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 SPAG5Q96R06 1193 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 SF3A3Q12874 501 aaKnown RBP eCLIP21.07■□□□□ 0.962e-6■■□□□ 13.6
SHANK3-202ENST00000414786 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 MAK16Q9BXY0 300 aaKnown RBP21.07■□□□□ 0.96
SHANK3-202ENST00000414786 KIF18AQ8NI77 898 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 CCDC12Q8WUD4 166 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-202ENST00000414786 SLC4A4Q9Y6R1 1079 aa21.07■□□□□ 0.96
SHANK3-202ENST00000414786 HGSO14964 777 aaPredicted RBP21.06■□□□□ 0.96
SHANK3-202ENST00000414786 POLD1P28340 1107 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 GJB2P29033 226 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 RAB3GAP1Q15042 981 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 UBE3BQ7Z3V4 1068 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 CEP83Q9Y592 693 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 CHMP2AO43633 222 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 SPECC1LQ69YQ0 1117 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 CCDC155Q8N6L0 562 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 HSF2BPO75031 334 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 HYPKQ9NX55 129 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 CUL4BQ13620 913 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 KMT5BQ4FZB7 885 aa21.06■□□□□ 0.96
SHANK3-202ENST00000414786 CRNKL1Q9BZJ0 848 aaKnown RBP21.06■□□□□ 0.96
SHANK3-202ENST00000414786 KIF4AO95239 1232 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 ABL1P00519 1130 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 NAPAP54920 295 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 SEPT14Q6ZU15 432 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 AKR1B10O60218 316 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
SHANK3-202ENST00000414786 CHST3Q7LGC8 479 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 CCDC7Q96M83 1385 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 N4BP3O15049 544 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 EIF6P56537 245 aaKnown RBP21.05■□□□□ 0.96
SHANK3-202ENST00000414786 CFAP157Q5JU67 520 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 TCEANC2Q96MN5 208 aa21.05■□□□□ 0.96
SHANK3-202ENST00000414786 KCNK9Q9NPC2 374 aa21.04■□□□□ 0.96
SHANK3-202ENST00000414786 NAIPQ13075 1403 aa21.04■□□□□ 0.96
SHANK3-202ENST00000414786 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
SHANK3-202ENST00000414786 GLRX3O76003 335 aaKnown RBP21.04■□□□□ 0.96
SHANK3-202ENST00000414786 DDX39AO00148 427 aaKnown RBP21.04■□□□□ 0.96
SHANK3-202ENST00000414786 ORC3Q9UBD5 711 aaPredicted RBP21.03■□□□□ 0.96
SHANK3-202ENST00000414786 GTF3C6Q969F1 213 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 MARCKSP29966 332 aaPredicted RBP21.03■□□□□ 0.96
SHANK3-202ENST00000414786 NECAB1Q8N987 351 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 JDP2Q8WYK2 163 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 KIFC2Q96AC6 838 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 TRIM6Q9C030 488 aaPredicted RBP21.03■□□□□ 0.96
SHANK3-202ENST00000414786 MICALCLQ6ZW33 695 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 AFG3L2Q9Y4W6 797 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 LDHCP07864 332 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 DIXDC1Q155Q3 683 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 C4orf50Q6ZRC1 276 aa21.03■□□□□ 0.96
SHANK3-202ENST00000414786 DCAF17Q5H9S7 520 aaPredicted RBP21.02■□□□□ 0.96
SHANK3-202ENST00000414786 NME9Q86XW9 330 aa21.02■□□□□ 0.96
SHANK3-202ENST00000414786 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
SHANK3-202ENST00000414786 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
SHANK3-202ENST00000414786 GNL1P36915 607 aaPredicted RBP21.02■□□□□ 0.95
SHANK3-202ENST00000414786 TNNI2P48788 182 aa21.02■□□□□ 0.95
SHANK3-202ENST00000414786 CEP135Q66GS9 1140 aa21.02■□□□□ 0.95
SHANK3-202ENST00000414786 ZNF830Q96NB3 372 aaPredicted RBP21.02■□□□□ 0.95
SHANK3-202ENST00000414786 CWC25Q9NXE8 425 aaPredicted RBP21.01■□□□□ 0.95
SHANK3-202ENST00000414786 DAPK3O43293 454 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 ASIC1P78348 528 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms