RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 HOXC9P31274 260 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 HPS1Q92902 700 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 RGPD2P0DJD1 1756 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 ATRNO75882 1429 aa9.25□□□□□ -0.93
LINC00343-201ENST00000414368 SOCS7O14512 581 aa9.25□□□□□ -0.93
LINC00343-201ENST00000414368 VPS72Q15906 364 aa9.25□□□□□ -0.93
LINC00343-201ENST00000414368 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
LINC00343-201ENST00000414368 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
LINC00343-201ENST00000414368 TRPC5Q9UL62 973 aaPredicted RBP9.25□□□□□ -0.93
LINC00343-201ENST00000414368 COL5A2P05997 1499 aaPredicted RBP9.25□□□□□ -0.93
LINC00343-201ENST00000414368 CSB-PGBD3P0DP91 1061 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 RXRBP28702 533 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 MTHFSP49914 203 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 ANKRD24Q8TF21 1146 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 GJD4Q96KN9 370 aaPredicted RBP9.24□□□□□ -0.93
LINC00343-201ENST00000414368 COG6Q9Y2V7 657 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 SPATA31A5Q5VU36 1347 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 SPATA31A7Q8IWB4 1347 aa9.24□□□□□ -0.93
LINC00343-201ENST00000414368 ZBTB24O43167 697 aaPredicted RBP9.23□□□□□ -0.93
LINC00343-201ENST00000414368 RBM6P78332 1123 aaKnown RBP9.23□□□□□ -0.93
LINC00343-201ENST00000414368 TOM1L2Q6ZVM7 507 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 LRRN4Q8WUT4 740 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 GLI3P10071 1580 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 SPATA31A1Q5TZJ5 1347 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 WDR17Q8IZU2 1322 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 FLT4P35916 1363 aa9.23□□□□□ -0.93
LINC00343-201ENST00000414368 ABCC6O95255 1503 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 ABL2P42684 1182 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 GDPD2Q9HCC8 539 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 INSRP06213 1382 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 PARD3Q8TEW0 1356 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
LINC00343-201ENST00000414368 CRB1P82279 1406 aa9.22□□□□□ -0.93
LINC00343-201ENST00000414368 JUNDP17535 347 aa9.21□□□□□ -0.94
LINC00343-201ENST00000414368 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
LINC00343-201ENST00000414368 NBPF6Q5VWK0 638 aa9.21□□□□□ -0.94
LINC00343-201ENST00000414368 USHBP1Q8N6Y0 703 aa9.21□□□□□ -0.94
LINC00343-201ENST00000414368 NBPF4Q96M43 638 aa9.21□□□□□ -0.94
LINC00343-201ENST00000414368 HMX1Q9NP08 348 aaPredicted RBP9.21□□□□□ -0.94
LINC00343-201ENST00000414368 KIF24Q5T7B8 1368 aa9.21□□□□□ -0.94
LINC00343-201ENST00000414368 BRWD3Q6RI45 1802 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 TRAK2O60296 914 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 LYPD8Q6UX82 237 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 CARD10Q9BWT7 1032 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
LINC00343-201ENST00000414368 TBC1D2BQ9UPU7 963 aa9.2□□□□□ -0.94
LINC00343-201ENST00000414368 SMG6Q86US8 1419 aaKnown RBP9.2□□□□□ -0.94
LINC00343-201ENST00000414368 RALBP1Q15311 655 aa9.19□□□□□ -0.94
LINC00343-201ENST00000414368 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
LINC00343-201ENST00000414368 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
LINC00343-201ENST00000414368 EP400Q96L91 3159 aa9.19□□□□□ -0.94
LINC00343-201ENST00000414368 RGS12O14924 1447 aa9.18□□□□□ -0.94
LINC00343-201ENST00000414368 IL13P35225 146 aa9.18□□□□□ -0.94
LINC00343-201ENST00000414368 FAM208AQ9UK61 1670 aaKnown RBP9.18□□□□□ -0.94
LINC00343-201ENST00000414368 WNK3Q9BYP7 1800 aa9.17□□□□□ -0.94
LINC00343-201ENST00000414368 DIAPH1O60610 1272 aaKnown RBP9.17□□□□□ -0.94
LINC00343-201ENST00000414368 CTHP32929 405 aa9.17□□□□□ -0.94
LINC00343-201ENST00000414368 NR6A1Q15406 480 aa9.17□□□□□ -0.94
LINC00343-201ENST00000414368 PTPRNQ16849 979 aa9.17□□□□□ -0.94
LINC00343-201ENST00000414368 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
LINC00343-201ENST00000414368 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
LINC00343-201ENST00000414368 THRAP3Q9Y2W1 955 aaKnown RBP9.17□□□□□ -0.94
LINC00343-201ENST00000414368 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
LINC00343-201ENST00000414368 THSD7AQ9UPZ6 1657 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 COL3A1P02461 1466 aaPredicted RBP9.16□□□□□ -0.94
LINC00343-201ENST00000414368 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
LINC00343-201ENST00000414368 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
LINC00343-201ENST00000414368 DXOO77932 396 aaKnown RBP9.16□□□□□ -0.94
LINC00343-201ENST00000414368 FAM182BQ5T319 152 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 PRDM9Q9NQV7 894 aa9.16□□□□□ -0.94
LINC00343-201ENST00000414368 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 RGPD1P0DJD0 1748 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
LINC00343-201ENST00000414368 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
LINC00343-201ENST00000414368 ANP32CO43423 234 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 IGHA1P01876 353 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 HMOX1P09601 288 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 IL2RBP14784 551 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 CCDC184Q52MB2 194 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
LINC00343-201ENST00000414368 MEGF6O75095 1541 aa9.15□□□□□ -0.95
LINC00343-201ENST00000414368 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
LINC00343-201ENST00000414368 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms