RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
LINC00887-202ENST00000414120 ELP1O95163 1332 aa16.18■□□□□ 0.18
LINC00887-202ENST00000414120 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
LINC00887-202ENST00000414120 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
LINC00887-202ENST00000414120 HOMER3Q9NSC5 361 aa16.18■□□□□ 0.18
LINC00887-202ENST00000414120 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
LINC00887-202ENST00000414120 LAMC1P11047 1609 aa16.18■□□□□ 0.18
LINC00887-202ENST00000414120 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
LINC00887-202ENST00000414120 ARPC5LQ9BPX5 153 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
LINC00887-202ENST00000414120 ECEL1O95672 775 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 PEX19P40855 299 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 DDX11Q96FC9 970 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
LINC00887-202ENST00000414120 ARGLU1Q9NWB6 273 aaPredicted RBP16.17■□□□□ 0.18
LINC00887-202ENST00000414120 MICAL1Q8TDZ2 1067 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 TPD52L2O43399 206 aaKnown RBP16.16■□□□□ 0.18
LINC00887-202ENST00000414120 PAX3P23760 479 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 FILIP1LQ4L180 1135 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 PLEKHG4BQ96PX9 1271 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 AKAP2Q9Y2D5 859 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
LINC00887-202ENST00000414120 SYCE3A1L190 88 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 K7ELQ4 463 aaPredicted RBP16.16■□□□□ 0.18
LINC00887-202ENST00000414120 ADCY5O95622 1261 aa16.16■□□□□ 0.18
LINC00887-202ENST00000414120 ATF3P18847 181 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 ST5P78524 1137 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
LINC00887-202ENST00000414120 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 GTF3C6Q969F1 213 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 SLC24A3Q9HC58 644 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 H7C1W4 665 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 MCTP1Q6DN14 999 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 NBPF15Q8N660 670 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 C17orf50Q8WW18 174 aa16.15■□□□□ 0.18
LINC00887-202ENST00000414120 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
LINC00887-202ENST00000414120 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 NF2P35240 595 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 PYCARDQ9ULZ3 195 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 OATP04181 439 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 HNRNPH1P31943 449 aaKnown RBP16.14■□□□□ 0.17
LINC00887-202ENST00000414120 HHATQ5VTY9 493 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 ABCF2Q9UG63 623 aa16.14■□□□□ 0.17
LINC00887-202ENST00000414120 RBM47A0AV96 593 aaKnown RBP16.13■□□□□ 0.17
LINC00887-202ENST00000414120 GPTP24298 496 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 TMF1P82094 1093 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 TMED1Q13445 227 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 CCDC178Q5BJE1 867 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 CDK19Q9BWU1 502 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 KCNF1Q9H3M0 494 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
LINC00887-202ENST00000414120 IGHDP01880 384 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
LINC00887-202ENST00000414120 CCNHP51946 323 aaPredicted RBP16.12■□□□□ 0.17
LINC00887-202ENST00000414120 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
LINC00887-202ENST00000414120 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 TESK2Q96S53 571 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 UTP6Q9NYH9 597 aaKnown RBP16.12■□□□□ 0.17
LINC00887-202ENST00000414120 NAT1P18440 290 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 SRRTQ9BXP5 876 aaKnown RBP16.12■□□□□ 0.17
LINC00887-202ENST00000414120 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 RLBP1P12271 317 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 KIAA1328Q86T90 577 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 MSH6P52701 1360 aa16.12■□□□□ 0.17
LINC00887-202ENST00000414120 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 ZSCAN9O15535 394 aaPredicted RBP16.11■□□□□ 0.17
LINC00887-202ENST00000414120 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 LRRC31Q6UY01 552 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 TDRD7Q8NHU6 1098 aaKnown RBP16.11■□□□□ 0.17
LINC00887-202ENST00000414120 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 CHD2O14647 1828 aaKnown RBP16.11■□□□□ 0.17
LINC00887-202ENST00000414120 SFSWAPQ12872 951 aaKnown RBP16.11■□□□□ 0.17
LINC00887-202ENST00000414120 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 SDCCAG8Q86SQ7 713 aaPredicted RBP16.11■□□□□ 0.17
LINC00887-202ENST00000414120 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 TECPR2O15040 1411 aa16.11■□□□□ 0.17
LINC00887-202ENST00000414120 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 WASLO00401 505 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-202ENST00000414120 ZNF215Q9UL58 517 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-202ENST00000414120 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 NAA30Q147X3 362 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-202ENST00000414120 TMCO3Q6UWJ1 677 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 N4BP2L2Q92802 583 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-202ENST00000414120 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 DISP3Q9P2K9 1392 aa16.1■□□□□ 0.17
LINC00887-202ENST00000414120 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 SMAPO00193 183 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 ERLIN2O94905 339 aa16.09■□□□□ 0.17
LINC00887-202ENST00000414120 RAB27AP51159 221 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms