RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 HTRA3P83110 453 aa13.03□□□□□ -0.32
NCKIPSD-202ENST00000413374 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
NCKIPSD-202ENST00000413374 FZD9O00144 591 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 PDE8AO60658 829 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 SBF1O95248 1867 aa13.02□□□□□ -0.33
NCKIPSD-202ENST00000413374 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 F6X3S4 739 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 FSTL1Q12841 308 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
NCKIPSD-202ENST00000413374 CACNA1SQ13698 1873 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 SNED1Q8TER0 1413 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 ZNF521Q96K83 1311 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 GPSM2P81274 684 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
NCKIPSD-202ENST00000413374 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-202ENST00000413374 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 APLP1P51693 650 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
NCKIPSD-202ENST00000413374 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 H7C1W4 665 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 GCKRQ14397 625 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 MIER1Q8N108 512 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 GPC2Q8N158 579 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 ZNRF3Q9ULT6 936 aa12.98□□□□□ -0.33
NCKIPSD-202ENST00000413374 RAD17O75943 681 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 EPHX2P34913 555 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 CTSWP56202 376 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 CXCL9Q07325 125 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 LINS1Q8NG48 757 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 GREM2Q9H772 168 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
NCKIPSD-202ENST00000413374 COL4A5P29400 1685 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 CDHR2Q9BYE9 1310 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 E9PSI1 815 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 EPS15P42566 896 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 VPS33BQ9H267 617 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
NCKIPSD-202ENST00000413374 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 WTIPA6NIX2 430 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 LMOD1P29536 600 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 TIAM2Q8IVF5 1701 aa12.95□□□□□ -0.34
NCKIPSD-202ENST00000413374 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 COL4A1P02462 1669 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 YDJCA8MPS7 323 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 G3V3G9 751 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 UFL1O94874 794 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 GMPSP49915 693 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 SCNN1DP51172 638 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 CASP7P55210 303 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-202ENST00000413374 ITGA6P23229 1130 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 DNAJC5GQ8N7S2 189 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 EYA3Q99504 573 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-202ENST00000413374 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms