RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 MCM10Q7L590 875 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 PHACTR3Q96KR7 559 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 SLC10A3P09131 477 aa17.05■□□□□ 0.32
PCCA-204ENST00000413170 SAMD7Q7Z3H4 446 aa17.05■□□□□ 0.32
PCCA-204ENST00000413170 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
PCCA-204ENST00000413170 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
PCCA-204ENST00000413170 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 ABCC4O15439 1325 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
PCCA-204ENST00000413170 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
PCCA-204ENST00000413170 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
PCCA-204ENST00000413170 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
PCCA-204ENST00000413170 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 NTSR2O95665 410 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 EGFRP00533 1210 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 NUP98P52948 1817 aa17.03■□□□□ 0.32
PCCA-204ENST00000413170 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
PCCA-204ENST00000413170 MPNDQ8N594 471 aa17.02■□□□□ 0.32
PCCA-204ENST00000413170 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
PCCA-204ENST00000413170 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
PCCA-204ENST00000413170 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
PCCA-204ENST00000413170 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
PCCA-204ENST00000413170 DCPSQ96C86 337 aaKnown RBP17.01■□□□□ 0.31
PCCA-204ENST00000413170 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
PCCA-204ENST00000413170 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
PCCA-204ENST00000413170 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
PCCA-204ENST00000413170 MKI67P46013 3256 aaKnown RBP17.01■□□□□ 0.31
PCCA-204ENST00000413170 MYL6BP14649 208 aa17■□□□□ 0.31
PCCA-204ENST00000413170 RASAL3Q86YV0 1011 aa17■□□□□ 0.31
PCCA-204ENST00000413170 ZNF296Q8WUU4 475 aaPredicted RBP17■□□□□ 0.31
PCCA-204ENST00000413170 PSMD14O00487 310 aa16.99■□□□□ 0.31
PCCA-204ENST00000413170 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
PCCA-204ENST00000413170 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
PCCA-204ENST00000413170 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
PCCA-204ENST00000413170 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
PCCA-204ENST00000413170 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
PCCA-204ENST00000413170 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
PCCA-204ENST00000413170 DPF2Q92785 391 aa16.97■□□□□ 0.31
PCCA-204ENST00000413170 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
PCCA-204ENST00000413170 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
PCCA-204ENST00000413170 BBOX1O75936 387 aa16.96■□□□□ 0.31
PCCA-204ENST00000413170 SULF1Q8IWU6 871 aa16.96■□□□□ 0.31
PCCA-204ENST00000413170 CDCA5Q96FF9 252 aa16.96■□□□□ 0.31
PCCA-204ENST00000413170 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
PCCA-204ENST00000413170 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
PCCA-204ENST00000413170 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.3
PCCA-204ENST00000413170 POLR2AP24928 1970 aaKnown RBP16.95■□□□□ 0.3
PCCA-204ENST00000413170 KIF4BQ2VIQ3 1234 aa16.95■□□□□ 0.3
PCCA-204ENST00000413170 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
PCCA-204ENST00000413170 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
PCCA-204ENST00000413170 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
PCCA-204ENST00000413170 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
PCCA-204ENST00000413170 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCCA-204ENST00000413170 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
PCCA-204ENST00000413170 RIMBP2O15034 1052 aa16.93■□□□□ 0.3
PCCA-204ENST00000413170 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
PCCA-204ENST00000413170 TAF7Q15545 349 aaPredicted RBP16.93■□□□□ 0.3
PCCA-204ENST00000413170 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
PCCA-204ENST00000413170 KCNQ5Q9NR82 932 aa16.93■□□□□ 0.3
PCCA-204ENST00000413170 HTTP42858 3142 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 GPR25O00155 361 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
PCCA-204ENST00000413170 GRAPQ13588 217 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
PCCA-204ENST00000413170 LAMB2P55268 1798 aa16.92■□□□□ 0.3
PCCA-204ENST00000413170 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
PCCA-204ENST00000413170 PER1O15534 1290 aaPredicted RBP16.91■□□□□ 0.3
PCCA-204ENST00000413170 ECE2O60344 883 aa16.91■□□□□ 0.3
PCCA-204ENST00000413170 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
PCCA-204ENST00000413170 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
PCCA-204ENST00000413170 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
PCCA-204ENST00000413170 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.3
PCCA-204ENST00000413170 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
PCCA-204ENST00000413170 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
PCCA-204ENST00000413170 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCCA-204ENST00000413170 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
PCCA-204ENST00000413170 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
PCCA-204ENST00000413170 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.29
PCCA-204ENST00000413170 TAF1P21675 1872 aa16.88■□□□□ 0.29
PCCA-204ENST00000413170 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
PCCA-204ENST00000413170 C6orf229H3BNL8 230 aa16.88■□□□□ 0.29
PCCA-204ENST00000413170 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
PCCA-204ENST00000413170 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
PCCA-204ENST00000413170 FKBP1BP68106 108 aa16.88■□□□□ 0.29
PCCA-204ENST00000413170 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
PCCA-204ENST00000413170 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
PCCA-204ENST00000413170 CENPFP49454 3210 aa16.87■□□□□ 0.29
PCCA-204ENST00000413170 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
PCCA-204ENST00000413170 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
PCCA-204ENST00000413170 UBE2Q2LH0YL09 131 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms