RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
SSB-203ENST00000413002 GRAPLQ8TC17 118 aaPredicted RBP16.75■□□□□ 0.27
SSB-203ENST00000413002 DDX60Q8IY21 1712 aaKnown RBP16.75■□□□□ 0.27
SSB-203ENST00000413002 LAMB2P55268 1798 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 SBF1O95248 1867 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 FER1L6Q2WGJ9 1857 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 GCKRQ14397 625 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 COL4A1P02462 1669 aa16.74■□□□□ 0.27
SSB-203ENST00000413002 H7C1W4 665 aa16.73■□□□□ 0.27
SSB-203ENST00000413002 PDE8AO60658 829 aa16.73■□□□□ 0.27
SSB-203ENST00000413002 BBOX1O75936 387 aa16.73■□□□□ 0.27
SSB-203ENST00000413002 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
SSB-203ENST00000413002 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
SSB-203ENST00000413002 TAF1P21675 1872 aa16.72■□□□□ 0.27
SSB-203ENST00000413002 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
SSB-203ENST00000413002 RRAGCQ9HB90 399 aa16.72■□□□□ 0.27
SSB-203ENST00000413002 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
SSB-203ENST00000413002 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
SSB-203ENST00000413002 KIF3CO14782 793 aa16.71■□□□□ 0.27
SSB-203ENST00000413002 IARSP41252 1262 aaKnown RBP16.71■□□□□ 0.27
SSB-203ENST00000413002 CTSWP56202 376 aa16.71■□□□□ 0.27
SSB-203ENST00000413002 SP8Q8IXZ3 490 aa16.71■□□□□ 0.27
SSB-203ENST00000413002 PSMD1Q99460 953 aa16.71■□□□□ 0.27
SSB-203ENST00000413002 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
SSB-203ENST00000413002 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 GLTPD2A6NH11 291 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 CASP7P55210 303 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
SSB-203ENST00000413002 CCDC152Q4G0S7 254 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SSB-203ENST00000413002 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
SSB-203ENST00000413002 HSP90B1P14625 803 aaKnown RBP16.69■□□□□ 0.26
SSB-203ENST00000413002 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
SSB-203ENST00000413002 MPNDQ8N594 471 aa16.69■□□□□ 0.26
SSB-203ENST00000413002 GREM2Q9H772 168 aa16.69■□□□□ 0.26
SSB-203ENST00000413002 C1QTNF8P60827 252 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 AOC3Q16853 763 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
SSB-203ENST00000413002 COL4A5P29400 1685 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
SSB-203ENST00000413002 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
SSB-203ENST00000413002 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
SSB-203ENST00000413002 PPIP5K2O43314 1243 aa16.67■□□□□ 0.26
SSB-203ENST00000413002 GPSM2P81274 684 aa16.67■□□□□ 0.26
SSB-203ENST00000413002 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
SSB-203ENST00000413002 GPR101Q96P66 508 aaPredicted RBP16.67■□□□□ 0.26
SSB-203ENST00000413002 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
SSB-203ENST00000413002 POTECB2RU33 542 aa16.66■□□□□ 0.26
SSB-203ENST00000413002 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
SSB-203ENST00000413002 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
SSB-203ENST00000413002 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
SSB-203ENST00000413002 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
SSB-203ENST00000413002 CACNA1FO60840 1977 aa16.66■□□□□ 0.26
SSB-203ENST00000413002 GRM8O00222 908 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 TMC4Q7Z404 712 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
SSB-203ENST00000413002 PTPRCP08575 1304 aa16.65■□□□□ 0.26
SSB-203ENST00000413002 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 FZD9O00144 591 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 RIMBP2O15034 1052 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
SSB-203ENST00000413002 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
SSB-203ENST00000413002 FOXO4P98177 505 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.25
SSB-203ENST00000413002 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
SSB-203ENST00000413002 BCAR3O75815 825 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 CSF1RP07333 972 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 ITGA6P23229 1130 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 NIM1KQ8IY84 436 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
SSB-203ENST00000413002 SUPT20HQ8NEM7 779 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
SSB-203ENST00000413002 ANKIB1Q9P2G1 1089 aa16.63■□□□□ 0.25
SSB-203ENST00000413002 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
SSB-203ENST00000413002 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
SSB-203ENST00000413002 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
SSB-203ENST00000413002 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
SSB-203ENST00000413002 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
SSB-203ENST00000413002 DUOX1Q9NRD9 1551 aa16.61■□□□□ 0.25
SSB-203ENST00000413002 UFL1O94874 794 aa16.61■□□□□ 0.25
SSB-203ENST00000413002 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
SSB-203ENST00000413002 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
SSB-203ENST00000413002 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
SSB-203ENST00000413002 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
SSB-203ENST00000413002 TOMM70O94826 608 aa16.6■□□□□ 0.25
SSB-203ENST00000413002 DOK7Q18PE1 504 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms