RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 CWF19L2Q2TBE0 894 aaKnown RBP11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 MASTLQ96GX5 879 aa11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
RN7SKP3-201ENST00000411409 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 NPR1P16066 1061 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 CASP7P55210 303 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 RRP1P56182 461 aaKnown RBP11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
RN7SKP3-201ENST00000411409 CSF1RP07333 972 aa11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 SRGNP10124 158 aa11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
RN7SKP3-201ENST00000411409 BBOX1O75936 387 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 PIM2Q9P1W9 311 aa11.87□□□□□ -0.51
RN7SKP3-201ENST00000411409 ZBTB7BO15156 539 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 GNAI2P04899 355 aa11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 CTSWP56202 376 aa11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 DDX46Q7L014 1031 aaKnown RBP11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 RPGRQ92834 1020 aaKnown RBP11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 LAMB2P55268 1798 aa11.86□□□□□ -0.51
RN7SKP3-201ENST00000411409 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 MTX1Q13505 466 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 TTLL6Q8N841 843 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP3-201ENST00000411409 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP3-201ENST00000411409 RLBP1P12271 317 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 DPEP1P16444 411 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 KCNA3P22001 575 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 FOXO4P98177 505 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 GRAPQ13588 217 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 PANK1Q8TE04 598 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
RN7SKP3-201ENST00000411409 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 PLIN1O60240 522 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 MEIS3Q99687 375 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 VPS33BQ9H267 617 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 SUPT16HQ9Y5B9 1047 aaKnown RBP11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 ANKRD31Q8N7Z5 1873 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 MYH3P11055 1940 aa11.82□□□□□ -0.52
RN7SKP3-201ENST00000411409 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 RTKN2Q8IZC4 609 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 KAZALD1Q96I82 304 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 BSDC1Q9NW68 430 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
RN7SKP3-201ENST00000411409 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 HMMRO75330 724 aa11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 ITGA6P23229 1130 aa11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
RN7SKP3-201ENST00000411409 CIAO1O76071 339 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 CHRNA5P30532 468 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms