RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FBXO31Q5XUX0 539 aaPredicted RBP0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 TMEM151BQ8IW70 566 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 METTL22Q9BUU2 404 aaPredicted RBP0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 SMPD4Q9NXE4 827 aa0.85□□□□□ -2.27
RNU4-88P-201ENST00000411220 SPDYE16A6NNV3 312 aaPredicted RBP0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 GLI1P08151 1106 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 FHL2Q14192 279 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 RTP5Q14D33 572 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 BSPRYQ5W0U4 402 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 ZKSCAN2Q63HK3 967 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 FRMD5Q7Z6J6 570 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 SULF1Q8IWU6 871 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 AGGF1Q8N302 714 aaeCLIP0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 PI4K2BQ8TCG2 481 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 PXYLP1Q8TE99 480 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 SYMPKQ92797 1274 aaKnown RBP0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 KCNN1Q92952 543 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 CEP41Q9BYV8 373 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 CRISPLD1Q9H336 500 aa0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 DNAAF2Q9NVR5 837 aaKnown RBP0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 DAXXQ9UER7 740 aaPredicted RBP0.84□□□□□ -2.27
RNU4-88P-201ENST00000411220 INO80B-WBP1J3KQ70 363 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 KHNYNO15037 678 aaKnown RBP0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 MSX1P28360 303 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 PEAR1Q5VY43 1037 aaPredicted RBP0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 BEND4Q6ZU67 534 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 MICALCLQ6ZW33 695 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 FAM20CQ8IXL6 584 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 FBXL6Q8N531 539 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZNF784Q8NCA9 323 aaPredicted RBP0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 BAHD1Q8TBE0 780 aaPredicted RBP0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 CEP89Q96ST8 783 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 C1QTNF3Q9BXJ4 246 aa0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 INO80BQ9C086 356 aaPredicted RBP0.83□□□□□ -2.28
RNU4-88P-201ENST00000411220 NOTCH3Q9UM47 2321 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 LILRA1O75019 489 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 CTHP32929 405 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 MAPK7Q13164 816 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 MPRIPQ6WCQ1 1025 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 SP8Q8IXZ3 490 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 NLRP3Q96P20 1036 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 KCTD15Q96SI1 283 aaPredicted RBP0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 KCNF1Q9H3M0 494 aa0.82□□□□□ -2.28
RNU4-88P-201ENST00000411220 ANKRD33BA6NCL7 494 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZNF20P17024 532 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 PHKA2P46019 1235 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 SPRED1Q7Z699 444 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 NUDT8Q8WV74 236 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZG16BQ96DA0 208 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 FAM46AQ96IP4 442 aaKnown RBP0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZNF747Q9BV97 191 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 KRTAP3-1Q9BYR8 98 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 VPS11Q9H270 941 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 EPB41L4BQ9H329 900 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 DCP1AQ9NPI6 582 aaPredicted RBP0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 MARK1Q9P0L2 795 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 LTBP3Q9NS15 1303 aa0.81□□□□□ -2.28
RNU4-88P-201ENST00000411220 DEAF1O75398 565 aaPredicted RBP0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 OATP04181 439 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 FBLP22087 321 aaKnown RBP0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZNF385BQ569K4 471 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 INTS6LQ5JSJ4 861 aaKnown RBP0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 TMPRSS7Q7RTY8 843 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 NLRP8Q86W28 1048 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZBTB8BQ8NAP8 495 aaPredicted RBP0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 HLA-CQ95604 372 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 SLC26A8Q96RN1 970 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 ADAM19Q9H013 955 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 TMPRSS4Q9NRS4 437 aa0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZC3H7BQ9UGR2 993 aaKnown RBP0.8□□□□□ -2.28
RNU4-88P-201ENST00000411220 PRICKLE3O43900 615 aaPredicted RBP0.79□□□□□ -2.28
RNU4-88P-201ENST00000411220 SRFP11831 508 aa0.79□□□□□ -2.28
RNU4-88P-201ENST00000411220 CNTNAP2Q9UHC6 1331 aa0.79□□□□□ -2.28
RNU4-88P-201ENST00000411220 MAGEB6P1A0A0J9YX57 407 aa0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 A0A1W2PRU2 124 aa0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZC3H6P61129 1189 aaKnown RBP0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 MRPS21P82921 87 aaKnown RBP0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 KRTAP15-1Q3LI76 137 aa0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 FYB2Q5VWT5 728 aa0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 ZC3HAV1Q7Z2W4 902 aaKnown RBP0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 CDV3Q9UKY7 258 aaKnown RBP0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 CNOT6Q9ULM6 557 aaKnown RBP0.78□□□□□ -2.28
RNU4-88P-201ENST00000411220 RFXAPO00287 272 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 CAPNS1P04632 268 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 CD8BP10966 210 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 BMP3P12645 472 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 AFMP43652 599 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 TMEM67Q5HYA8 995 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 IFNLR1Q8IU57 520 aaPredicted RBP0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 SYT8Q8NBV8 401 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 MISP3Q96FF7 219 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 IKZF4Q9H2S9 585 aa0.77□□□□□ -2.29
RNU4-88P-201ENST00000411220 KDM4AO75164 1064 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 FAM157BP0CG42 384 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 USP46P62068 366 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 FAM69CQ0P6D2 419 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 BNIP3Q12983 259 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 KRTAP13-3Q3SY46 172 aa0.76□□□□□ -2.29
RNU4-88P-201ENST00000411220 WFDC8Q8IUA0 241 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms