RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 IMPG2Q9BZV3 1241 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 NACA2Q9H009 215 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC152Q4G0S7 254 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
PRPF40A-202ENST00000410080 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.35
PRPF40A-202ENST00000410080 UBA7P41226 1012 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 TPD52P55327 224 aaPredicted RBP12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 ARID5AQ03989 594 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 TRMT1Q9NXH9 659 aaKnown RBP12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC160A6NGH7 325 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 CRCPO75575 148 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 STAT6P42226 847 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 C6orf163Q5TEZ5 329 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 MX1P20591 662 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 SATB1Q01826 763 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
PRPF40A-202ENST00000410080 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 KRT13P13646 458 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 LDHCP07864 332 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 RASA3Q14644 834 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 ANO10Q9NW15 660 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 TXNDC16Q9P2K2 825 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 RNF34Q969K3 372 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 GPHNQ9NQX3 736 aaPredicted RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 B4DLN1 442 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 FAM107BQ9H098 131 aa12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
PRPF40A-202ENST00000410080 FAM13AO94988 1023 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 PICK1Q9NRD5 415 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 CSPG5O95196 566 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 KIF4AO95239 1232 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
PRPF40A-202ENST00000410080 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 LPXNO60711 386 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 TTC36A6NLP5 189 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC172P0C7W6 258 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 USP37Q86T82 979 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 PKD2L1Q9P0L9 805 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 PLB1Q6P1J6 1458 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 AFMP43652 599 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 CCT6BQ92526 530 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 FBLN1P23142 703 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 CUL4BQ13620 913 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 RAB3GAP1Q15042 981 aa12.8□□□□□ -0.36
PRPF40A-202ENST00000410080 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 BACH1O14867 736 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 ATP2C2O75185 946 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms