RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MYRIPQ8NFW9 859 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 FAM200AQ8TCP9 573 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 SIL1Q9H173 461 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 PHKG2P15735 406 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 PTPN12Q05209 780 aaKnown RBP19.8■□□□□ 0.76
LIMS2-208ENST00000410011 NUP62CLQ9H1M0 184 aa19.8■□□□□ 0.76
LIMS2-208ENST00000410011 C5P01031 1676 aa19.79■□□□□ 0.76
LIMS2-208ENST00000410011 TNNI3KQ59H18 835 aa19.79■□□□□ 0.76
LIMS2-208ENST00000410011 MYD88Q99836 296 aa19.79■□□□□ 0.76
LIMS2-208ENST00000410011 DDX19AQ9NUU7 478 aaKnown RBP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 U3KPZ7 1027 aaPredicted RBP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 FPGT-TNNI3KV9GXZ4 949 aa19.79■□□□□ 0.76
LIMS2-208ENST00000410011 SNRPA1P09661 255 aaKnown RBP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 GTF2F1P35269 517 aaKnown RBP eCLIP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 DBNLQ9UJU6 430 aaKnown RBP19.79■□□□□ 0.76
LIMS2-208ENST00000410011 GOLGA6L6A8MZA4 724 aa19.78■□□□□ 0.76
LIMS2-208ENST00000410011 COL9A3Q14050 684 aaPredicted RBP19.78■□□□□ 0.76
LIMS2-208ENST00000410011 TTC12Q9H892 705 aaPredicted RBP19.78■□□□□ 0.76
LIMS2-208ENST00000410011 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 GTF3C6Q969F1 213 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 NEK1Q96PY6 1258 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 AP5Z1O43299 807 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 TATP17735 454 aaPredicted RBP19.77■□□□□ 0.76
LIMS2-208ENST00000410011 IFNL2Q8IZJ0 200 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 NFATC2IPQ8NCF5 419 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 KLHDC4Q8TBB5 520 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 HAUS7Q99871 368 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 TAF6LQ9Y6J9 622 aa19.77■□□□□ 0.76
LIMS2-208ENST00000410011 TMEM94Q12767 1356 aa19.77■□□□□ 0.75
LIMS2-208ENST00000410011 KIAA1524Q8TCG1 905 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
LIMS2-208ENST00000410011 ZNF496Q96IT1 587 aaPredicted RBP19.76■□□□□ 0.75
LIMS2-208ENST00000410011 SPATA32Q96LK8 384 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 ZNF830Q96NB3 372 aaPredicted RBP19.76■□□□□ 0.75
LIMS2-208ENST00000410011 MYL6BP14649 208 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 LIG1P18858 919 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 MCMDC2Q4G0Z9 681 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 LLPHQ9BRT6 129 aaKnown RBP19.76■□□□□ 0.75
LIMS2-208ENST00000410011 ZSCAN16Q9H4T2 348 aaPredicted RBP19.76■□□□□ 0.75
LIMS2-208ENST00000410011 FAM13BQ9NYF5 915 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 MRVI1Q9Y6F6 885 aa19.76■□□□□ 0.75
LIMS2-208ENST00000410011 CAVIN2O95810 425 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 TYRO3Q06418 890 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 DCAF5Q96JK2 942 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 ALS2Q96Q42 1657 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 HMGB1P09429 215 aaKnown RBP19.75■□□□□ 0.75
LIMS2-208ENST00000410011 RBM10P98175 930 aaKnown RBP19.75■□□□□ 0.75
LIMS2-208ENST00000410011 TFCP2Q12800 502 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 LMOD2Q6P5Q4 547 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
LIMS2-208ENST00000410011 GOLGA6L4A6NEF3 574 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 CASP7P55210 303 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 DNTTIP2Q5QJE6 756 aaKnown RBP19.74■□□□□ 0.75
LIMS2-208ENST00000410011 TNMDQ9H2S6 317 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 CLSTN2Q9H4D0 955 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 DACT1Q9NYF0 836 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
LIMS2-208ENST00000410011 SMARCC2Q8TAQ2 1214 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 GPR108Q9NPR9 543 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 USP16Q9Y5T5 823 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 ZNF609O15014 1411 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 RESTQ13127 1097 aa19.73■□□□□ 0.75
LIMS2-208ENST00000410011 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 FAM173BQ6P4H8 233 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 KBTBD3Q8NAB2 608 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 PLBD2Q8NHP8 589 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 EDC3Q96F86 508 aaKnown RBP19.72■□□□□ 0.75
LIMS2-208ENST00000410011 CFAP45Q9UL16 551 aa19.72■□□□□ 0.75
LIMS2-208ENST00000410011 PALLDQ8WX93 1383 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 CYP21A2P08686 494 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 KCNF1Q9H3M0 494 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 DTNBO60941 627 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 Q6ZUG5 572 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.71■□□□□ 0.75
LIMS2-208ENST00000410011 AGXT2Q9BYV1 514 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 HELLSQ9NRZ9 838 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 MEGF6O75095 1541 aa19.71■□□□□ 0.75
LIMS2-208ENST00000410011 PFKFB2O60825 505 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
LIMS2-208ENST00000410011 COL18A1P39060 1754 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 NAA16Q6N069 864 aaPredicted RBP19.7■□□□□ 0.74
LIMS2-208ENST00000410011 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 DBNDD2Q9BQY9 259 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 DSCC1Q9BVC3 393 aa19.7■□□□□ 0.74
LIMS2-208ENST00000410011 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
LIMS2-208ENST00000410011 A0A087WZG4 1122 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 H7C1W4 665 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 ZC3H6P61129 1189 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms