RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
PMS1-204ENST00000409823 IBTKQ9P2D0 1353 aaPredicted RBP15.66■□□□□ 0.1
PMS1-204ENST00000409823 CENPQQ7L2Z9 268 aaPredicted RBP15.66■□□□□ 0.1
PMS1-204ENST00000409823 MTX1Q13505 466 aa15.65■□□□□ 0.1
PMS1-204ENST00000409823 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
PMS1-204ENST00000409823 POLA2Q14181 598 aa15.65■□□□□ 0.1
PMS1-204ENST00000409823 SEC31BQ9NQW1 1179 aa15.65■□□□□ 0.1
PMS1-204ENST00000409823 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 PLA2G12BQ9BX93 195 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 ITGA6P23229 1130 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
PMS1-204ENST00000409823 CSF1RP07333 972 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
PMS1-204ENST00000409823 ST5P78524 1137 aa15.63■□□□□ 0.09
PMS1-204ENST00000409823 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
PMS1-204ENST00000409823 IFIT5Q13325 482 aaKnown RBP15.63■□□□□ 0.09
PMS1-204ENST00000409823 OS9Q13438 667 aaPredicted RBP15.63■□□□□ 0.09
PMS1-204ENST00000409823 NLRP3Q96P20 1036 aa15.63■□□□□ 0.09
PMS1-204ENST00000409823 RFX5P48382 616 aaPredicted RBP15.63■□□□□ 0.09
PMS1-204ENST00000409823 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
PMS1-204ENST00000409823 SMC5Q8IY18 1101 aa15.62■□□□□ 0.09
PMS1-204ENST00000409823 LNPKQ9C0E8 428 aa15.62■□□□□ 0.09
PMS1-204ENST00000409823 SLC10A5Q5PT55 438 aa15.62■□□□□ 0.09
PMS1-204ENST00000409823 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
PMS1-204ENST00000409823 COL24A1Q17RW2 1714 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.61■□□□□ 0.09
PMS1-204ENST00000409823 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 GCC1Q96CN9 775 aa15.61■□□□□ 0.09
PMS1-204ENST00000409823 ANKRD18BA2A2Z9 1011 aa15.6■□□□□ 0.09
PMS1-204ENST00000409823 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
PMS1-204ENST00000409823 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
PMS1-204ENST00000409823 RGS3P49796 1198 aa15.59■□□□□ 0.09
PMS1-204ENST00000409823 SLC51AQ86UW1 340 aa15.59■□□□□ 0.09
PMS1-204ENST00000409823 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
PMS1-204ENST00000409823 SLC16A10Q8TF71 515 aa15.59■□□□□ 0.09
PMS1-204ENST00000409823 G3BP1Q13283 466 aaKnown RBP eCLIP15.59■□□□□ 0.09
PMS1-204ENST00000409823 LDHAL6AQ6ZMR3 332 aa15.58■□□□□ 0.09
PMS1-204ENST00000409823 COPRSQ9NQ92 184 aa15.58■□□□□ 0.09
PMS1-204ENST00000409823 PPP1R1BQ9UD71 204 aaPredicted RBP15.58■□□□□ 0.09
PMS1-204ENST00000409823 NUCB1Q02818 461 aa15.58■□□□□ 0.08
PMS1-204ENST00000409823 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
PMS1-204ENST00000409823 CELF1Q92879 486 aaKnown RBP15.58■□□□□ 0.08
PMS1-204ENST00000409823 MTFR1LQ9H019 292 aa15.58■□□□□ 0.08
PMS1-204ENST00000409823 TNRC6CQ9HCJ0 1690 aaKnown RBP15.58■□□□□ 0.08
PMS1-204ENST00000409823 CHD1LQ86WJ1 897 aa15.58■□□□□ 0.08
PMS1-204ENST00000409823 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 COL4A1P02462 1669 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 SASH1O94885 1247 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 OTUD7AQ8TE49 926 aaPredicted RBP15.57■□□□□ 0.08
PMS1-204ENST00000409823 LRRCC1Q9C099 1032 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 CNNM1Q9NRU3 951 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
PMS1-204ENST00000409823 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
PMS1-204ENST00000409823 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
PMS1-204ENST00000409823 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
PMS1-204ENST00000409823 DDX46Q7L014 1031 aaKnown RBP15.56■□□□□ 0.08
PMS1-204ENST00000409823 HELBQ8NG08 1087 aaPredicted RBP15.56■□□□□ 0.08
PMS1-204ENST00000409823 MPHOSPH8Q99549 860 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 WWC3Q9ULE0 1092 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 TAF1P21675 1872 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 CHRNA5P30532 468 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 TFCP2Q12800 502 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 MYH3P11055 1940 aa15.56■□□□□ 0.08
PMS1-204ENST00000409823 EYA2O00167 538 aa15.55■□□□□ 0.08
PMS1-204ENST00000409823 PDE4AP27815 886 aa15.55■□□□□ 0.08
PMS1-204ENST00000409823 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
PMS1-204ENST00000409823 SNAP23O00161 211 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 POLD1P28340 1107 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
PMS1-204ENST00000409823 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
PMS1-204ENST00000409823 CDC5LQ99459 802 aaKnown RBP15.54■□□□□ 0.08
PMS1-204ENST00000409823 RAB11FIP3O75154 756 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 TAF5LO75529 589 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
PMS1-204ENST00000409823 WTIPA6NIX2 430 aaPredicted RBP15.53■□□□□ 0.08
PMS1-204ENST00000409823 PDE6BP35913 854 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
PMS1-204ENST00000409823 METTL24Q5JXM2 366 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 RIPOR2Q9Y4F9 1068 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 SRGNP10124 158 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 IL15P40933 162 aaPredicted RBP15.53■□□□□ 0.08
PMS1-204ENST00000409823 C2CD5Q86YS7 1000 aa15.53■□□□□ 0.08
PMS1-204ENST00000409823 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
PMS1-204ENST00000409823 CASZ1Q86V15 1759 aa15.52■□□□□ 0.08
PMS1-204ENST00000409823 LAMB2P55268 1798 aa15.52■□□□□ 0.08
PMS1-204ENST00000409823 PTGER2P43116 358 aa15.52■□□□□ 0.07
PMS1-204ENST00000409823 TIMM10P62072 90 aa15.52■□□□□ 0.07
PMS1-204ENST00000409823 AACSQ86V21 672 aa15.52■□□□□ 0.07
PMS1-204ENST00000409823 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.07
PMS1-204ENST00000409823 EAF2Q96CJ1 260 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms