RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 ME3Q16798 604 aa13.27□□□□□ -0.28
PSMD1-203ENST00000409643 KLHDC4Q8TBB5 520 aa13.27□□□□□ -0.28
PSMD1-203ENST00000409643 HAUS7Q99871 368 aa13.27□□□□□ -0.28
PSMD1-203ENST00000409643 TAF5LO75529 589 aa13.27□□□□□ -0.29
PSMD1-203ENST00000409643 TFCP2Q12800 502 aa13.27□□□□□ -0.29
PSMD1-203ENST00000409643 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
PSMD1-203ENST00000409643 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
PSMD1-203ENST00000409643 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
PSMD1-203ENST00000409643 GADD45BO75293 160 aaPredicted RBP13.26□□□□□ -0.29
PSMD1-203ENST00000409643 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
PSMD1-203ENST00000409643 CNPY2Q9Y2B0 182 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
PSMD1-203ENST00000409643 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 SPEF2Q9C093 1822 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 GDPD2Q9HCC8 539 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
PSMD1-203ENST00000409643 KCPQ6ZWJ8 1503 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
PSMD1-203ENST00000409643 CCDC191Q8NCU4 936 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 TJP1Q07157 1748 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
PSMD1-203ENST00000409643 IL15P40933 162 aaPredicted RBP13.25□□□□□ -0.29
PSMD1-203ENST00000409643 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
PSMD1-203ENST00000409643 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
PSMD1-203ENST00000409643 FOXO4P98177 505 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 MCMDC2Q4G0Z9 681 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 KBTBD3Q8NAB2 608 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
PSMD1-203ENST00000409643 TOM1L2Q6ZVM7 507 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 ZNF589Q86UQ0 364 aaPredicted RBP13.24□□□□□ -0.29
PSMD1-203ENST00000409643 NAP1L5Q96NT1 182 aaPredicted RBP13.24□□□□□ -0.29
PSMD1-203ENST00000409643 LARP6Q9BRS8 491 aaKnown RBP13.24□□□□□ -0.29
PSMD1-203ENST00000409643 ELP1O95163 1332 aa13.24□□□□□ -0.29
PSMD1-203ENST00000409643 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 CIAO1O76071 339 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 KRT85P78386 507 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 ZNF609O15014 1411 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 FIBPO43427 364 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 IL2RBP14784 551 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 TOB2Q14106 344 aaPredicted RBP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.23□□□□□ -0.29
PSMD1-203ENST00000409643 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
PSMD1-203ENST00000409643 PIP4K2AP48426 406 aaPredicted RBP13.22□□□□□ -0.29
PSMD1-203ENST00000409643 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
PSMD1-203ENST00000409643 ZKSCAN5Q9Y2L8 839 aa13.22□□□□□ -0.29
PSMD1-203ENST00000409643 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
PSMD1-203ENST00000409643 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
PSMD1-203ENST00000409643 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
PSMD1-203ENST00000409643 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
PSMD1-203ENST00000409643 LRRFIP1Q32MZ4 808 aaKnown RBP13.21□□□□□ -0.29
PSMD1-203ENST00000409643 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
PSMD1-203ENST00000409643 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
PSMD1-203ENST00000409643 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
PSMD1-203ENST00000409643 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
PSMD1-203ENST00000409643 EYA2O00167 538 aa13.21□□□□□ -0.3
PSMD1-203ENST00000409643 TERF1P54274 439 aa13.21□□□□□ -0.3
PSMD1-203ENST00000409643 ATG9AQ7Z3C6 839 aa13.21□□□□□ -0.3
PSMD1-203ENST00000409643 OFD1O75665 1012 aa13.2□□□□□ -0.3
PSMD1-203ENST00000409643 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
PSMD1-203ENST00000409643 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
PSMD1-203ENST00000409643 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
PSMD1-203ENST00000409643 GTF3C6Q969F1 213 aa13.2□□□□□ -0.3
PSMD1-203ENST00000409643 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
PSMD1-203ENST00000409643 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
PSMD1-203ENST00000409643 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
PSMD1-203ENST00000409643 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
PSMD1-203ENST00000409643 TPM2P07951 284 aa13.19□□□□□ -0.3
PSMD1-203ENST00000409643 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
PSMD1-203ENST00000409643 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
PSMD1-203ENST00000409643 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
PSMD1-203ENST00000409643 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
PSMD1-203ENST00000409643 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
PSMD1-203ENST00000409643 ABCC12Q96J65 1359 aa13.18□□□□□ -0.3
PSMD1-203ENST00000409643 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
PSMD1-203ENST00000409643 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
PSMD1-203ENST00000409643 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
PSMD1-203ENST00000409643 A1BGP04217 495 aa13.18□□□□□ -0.3
PSMD1-203ENST00000409643 CYP21A2P08686 494 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms