RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
PTPRN2-205ENST00000409483 CD2BP2O95400 341 aaKnown RBP19.19■□□□□ 0.66
PTPRN2-205ENST00000409483 CAGE1Q8TC20 777 aa19.19■□□□□ 0.66
PTPRN2-205ENST00000409483 MAGEC2Q9UBF1 373 aaPredicted RBP19.19■□□□□ 0.66
PTPRN2-205ENST00000409483 SFPQP23246 707 aaKnown RBP eCLIP19.19■□□□□ 0.662e-6■■■■□ 20.2
PTPRN2-205ENST00000409483 TMX1Q9H3N1 280 aa19.19■□□□□ 0.66
PTPRN2-205ENST00000409483 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 KRT18P05783 430 aaKnown RBP19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 DZIP1Q86YF9 867 aaKnown RBP19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 PPP1R1BQ9UD71 204 aaPredicted RBP19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 SNX14Q9Y5W7 946 aa19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 WASF1Q92558 559 aa19.18■□□□□ 0.66
PTPRN2-205ENST00000409483 MCM5P33992 734 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 ANO6Q4KMQ2 910 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 MAP7D2Q96T17 732 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 SGSM2O43147 1006 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 IL2RBP14784 551 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 CPLX3Q8WVH0 158 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 DNAJC25Q9H1X3 360 aa19.17■□□□□ 0.66
PTPRN2-205ENST00000409483 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 SSRP1Q08945 709 aaKnown RBP19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 RBSNQ9H1K0 784 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 IQCA1Q86XH1 822 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 SIRT1Q96EB6 747 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 CTCFLQ8NI51 663 aaPredicted RBP19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 SMARCE1Q969G3 411 aa19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 TEX13AQ9BXU3 409 aaPredicted RBP19.16■□□□□ 0.66
PTPRN2-205ENST00000409483 MFSD6Q6ZSS7 791 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 SMTNL1A8MU46 457 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 SYNMO15061 1565 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 PTPN14Q15678 1187 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 SKIDA1Q1XH10 827 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 TANGO6Q9C0B7 1094 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 DACH1Q9UI36 760 aa19.15■□□□□ 0.66
PTPRN2-205ENST00000409483 ATP6V1AP38606 617 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 UNC5CLQ8IV45 518 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 MIGA1Q8NAN2 632 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 RRAGDQ9NQL2 400 aaPredicted RBP19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 JAG2Q9Y219 1238 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 ROBO2Q9HCK4 1378 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 PRC1O43663 620 aa19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 NCOA5Q9HCD5 579 aaKnown RBP19.14■□□□□ 0.65
PTPRN2-205ENST00000409483 CCDC196A0A1B0GTZ2 297 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 GADD45BO75293 160 aaPredicted RBP19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 PROSER3Q2NL68 480 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 TMC6Q7Z403 805 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 NEO1Q92859 1461 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 CBFA2T2O43439 604 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 TNNT1P13805 278 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 CCDC186Q7Z3E2 898 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 ALG1Q9BT22 464 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 CLCN1P35523 988 aa19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 METTL22Q9BUU2 404 aaPredicted RBP19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 NIP7Q9Y221 180 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPRN2-205ENST00000409483 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 A0A1B0GUL7 405 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 MPHOSPH10O00566 681 aaKnown RBP19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 TTF1Q15361 905 aaPredicted RBP19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 TNNI3KQ59H18 835 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 VAT1LQ9HCJ6 419 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 FPGT-TNNI3KV9GXZ4 949 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 MYOM2P54296 1465 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 PTPDC1A2A3K4 754 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 CYP7A1P22680 504 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
PTPRN2-205ENST00000409483 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 SLC27A2O14975 620 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 ZBTB43O43298 467 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 GCKRQ14397 625 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 STX1AQ16623 288 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 HSP90B2PQ58FF3 399 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 ZSCAN16Q9H4T2 348 aaPredicted RBP19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 SLC52A2Q9HAB3 445 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 KIAA0232Q92628 1395 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 RNF113AO15541 343 aaKnown RBP19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 NLRP5P59047 1200 aa19.11■□□□□ 0.65
PTPRN2-205ENST00000409483 STIM1Q13586 685 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 OTUD7BQ6GQQ9 843 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 PDCL2Q8N4E4 241 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 TOP1P11387 765 aaKnown RBP19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 RNF41Q9H4P4 317 aaPredicted RBP19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 BTG4Q9NY30 223 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 RAD50Q92878 1312 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 TSPY2A6NKD2 308 aa19.1■□□□□ 0.65
PTPRN2-205ENST00000409483 CTAGE5O15320 804 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms