RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TBX22Q9Y458 520 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 ATP8B2P98198 1209 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 LINS1Q8NG48 757 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 ZSCAN12O43309 604 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 EYA3Q99504 573 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 DDX19AQ9NUU7 478 aaKnown RBP28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 BTG4Q9NY30 223 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 C8orf58Q8NAV2 365 aa28.88■■■□□ 2.21
SPIRE1-202ENST00000409402 IRS4O14654 1257 aaPredicted RBP28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 MRPL50Q8N5N7 158 aaKnown RBP28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 GNAQP50148 359 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 SYCP3Q8IZU3 236 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 ERMNQ8TAM6 284 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 KLF18A0A0U1RQI7 1052 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 ANKRD2Q9GZV1 360 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 STX6O43752 255 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 MTIF2P46199 727 aaKnown RBP28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 CCDC40Q4G0X9 1142 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 SLC9C2Q5TAH2 1124 aa28.87■■■□□ 2.21
SPIRE1-202ENST00000409402 MCMDC2Q4G0Z9 681 aa28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 KIAA0556O60303 1618 aa28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 EIF2AK4Q9P2K8 1649 aaKnown RBP28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 ZBTB43O43298 467 aa28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 KANK3Q6NY19 840 aa28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 IL27Q8NEV9 243 aa28.86■■■□□ 2.21
SPIRE1-202ENST00000409402 MAGEB6P1A0A0J9YX57 407 aa28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 PLCG2P16885 1265 aa28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 IP6K1Q92551 441 aa28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 HDAC1Q13547 482 aaPredicted RBP28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 EZRP15311 586 aaKnown RBP28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 HOXC9P31274 260 aa28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 NUP88Q99567 741 aaPredicted RBP28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 VEZTQ9HBM0 779 aa28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 NSFL1CQ9UNZ2 370 aaKnown RBP28.85■■■□□ 2.21
SPIRE1-202ENST00000409402 NUCB1Q02818 461 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 TCERG1LQ5VWI1 586 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 TBCAO75347 108 aaKnown RBP28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 ANAPC15P60006 121 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 PRKCSHP14314 528 aaPredicted RBP28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 TRAPPC3LQ5T215 181 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 FAM114A1Q8IWE2 563 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 ZFYVE9O95405 1425 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 ANKRD44Q8N8A2 993 aa28.84■■■□□ 2.21
SPIRE1-202ENST00000409402 YEATS4O95619 227 aa28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 TDRD12Q587J7 1177 aaKnown RBP28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 EIF4G3O43432 1585 aaKnown RBP28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 UHRF1BP1Q6BDS2 1440 aa28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 BRF1Q92994 677 aa28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 FERMT2Q96AC1 680 aa28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 EYA1Q99502 592 aa28.83■■■□□ 2.21
SPIRE1-202ENST00000409402 GNAT2P19087 354 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 RTN1Q16799 776 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 TFIP11Q9UBB9 837 aaKnown RBP28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 RNMTO43148 476 aaKnown RBP28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 DRC1Q96MC2 740 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 KIF5CO60282 957 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 FAM193AP78312 1265 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 RBM17Q96I25 401 aaKnown RBP28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 PAG1Q9NWQ8 432 aa28.82■■■□□ 2.2
SPIRE1-202ENST00000409402 KIF2AO00139 706 aaPredicted RBP28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 GNPATO15228 680 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 USO1O60763 962 aaKnown RBP28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 SSFA2P28290 1259 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 VSIG10Q8N0Z9 540 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 POLR3AO14802 1390 aaPredicted RBP28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 BMP15O95972 392 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 SKAP1Q86WV1 359 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 CKAP2LQ8IYA6 745 aa28.81■■■□□ 2.2
SPIRE1-202ENST00000409402 BICD1Q96G01 975 aa28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 PDE1AP54750 535 aa28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 C16orf71Q8IYS4 520 aaPredicted RBP28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 ZSCAN16Q9H4T2 348 aaPredicted RBP28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 RBM25P49756 843 aaKnown RBP28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 GRM1Q13255 1194 aa28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 HEATR3Q7Z4Q2 680 aa28.8■■■□□ 2.2
SPIRE1-202ENST00000409402 PANK2Q9BZ23 570 aa28.79■■■□□ 2.2
SPIRE1-202ENST00000409402 SDSP20132 328 aa28.79■■■□□ 2.2
SPIRE1-202ENST00000409402 CCDC102BQ68D86 513 aa28.79■■■□□ 2.2
SPIRE1-202ENST00000409402 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
SPIRE1-202ENST00000409402 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 ABCC2Q92887 1545 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 RBM26Q5T8P6 1007 aaKnown RBP28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 STK32BQ9NY57 414 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 B4DLN1 442 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 MRPL12P52815 198 aaKnown RBP28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 STX1AQ16623 288 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 IGHDP01880 384 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 SMARCC2Q8TAQ2 1214 aa28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 RBM8AQ9Y5S9 174 aaKnown RBP28.78■■■□□ 2.2
SPIRE1-202ENST00000409402 RIMBP2O15034 1052 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 USP8P40818 1118 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 CCDC174Q6PII3 467 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 TBC1D2Q9BYX2 928 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 PPFIA3O75145 1194 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 BRPF3Q9ULD4 1205 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 ALG1Q9BT22 464 aa28.77■■■□□ 2.2
SPIRE1-202ENST00000409402 EXOC1Q9NV70 894 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms